RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 MATKP42679 507 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 MTA1Q13330 715 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 STX1AQ16623 288 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 FKBP15Q5T1M5 1219 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 TAF3Q5VWG9 929 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 RABEPKQ7Z6M1 372 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 NOP9Q86U38 636 aaKnown RBP19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 ERICH1Q86X53 443 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 ZNF366Q8N895 744 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 C18orf8Q96DM3 657 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 HSPA12BQ96MM6 686 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 NUP58Q9BVL2 599 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 FBRSQ9HAH7 460 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 TMEM9BQ9NQ34 198 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 PRSS16Q9NQE7 514 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 COX16Q9P0S2 106 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 SLC6A14Q9UN76 642 aa19.04■□□□□ 0.64
PRPF40A-209ENST00000486100 ATXN2Q99700 1313 aaKnown RBP19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 LRRC10BA6NIK2 292 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 MOCS3O95396 460 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 LSM8O95777 96 aaKnown RBP19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 SCNN1AP37088 669 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 CSKP41240 450 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 KLK7P49862 253 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 ST8SIA6P61647 398 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 MYL5Q02045 173 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 NME3Q13232 169 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 SYCP2LQ5T4T6 812 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 CCDC183Q5T5S1 534 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 DAB2IPQ5VWQ8 1189 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 MMS22LQ6ZRQ5 1243 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 KDM1BQ8NB78 822 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 ANKRD20A12PQ8NF67 263 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 CADM4Q8NFZ8 388 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 MYO19Q96H55 970 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.03■□□□□ 0.646e-9■■□□□ 13.2
PRPF40A-209ENST00000486100 LIMA1Q9UHB6 759 aaKnown RBP19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 DAAM1Q9Y4D1 1078 aa19.03■□□□□ 0.64
PRPF40A-209ENST00000486100 M0QYT0 321 aa19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 CFIP05156 583 aa19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 MMEP08473 750 aa19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 SERPINF2P08697 491 aa19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 COPB1P53618 953 aaKnown RBP19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 RNASE9P60153 205 aaKnown RBP19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 POLR2FP61218 127 aaKnown RBP19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 PITRM1Q5JRX3 1037 aa19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 WDR45BQ5MNZ6 344 aa19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 RABGAP1LQ5R372 815 aa19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 TTC39BQ5VTQ0 682 aaPredicted RBP19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 FBXL22Q6P050 247 aa19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 ZNF677Q86XU0 584 aa19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 RGL4Q8IZJ4 473 aa19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 EPS8L1Q8TE68 723 aa19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 NT5C3BQ969T7 300 aa19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 MRGPRX3Q96LB0 322 aa19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 NPY6RQ99463 290 aa19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 GPR174Q9BXC1 333 aa19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 FAM207AQ9NSI2 230 aaPredicted RBP19.02■□□□□ 0.64
PRPF40A-209ENST00000486100 SRPRAP08240 638 aaKnown RBP19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 ADRB1P08588 477 aa19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 ENGP17813 658 aa19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 CDK11BP21127 795 aaKnown RBP19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 ZBTB16Q05516 673 aa19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 GFPT1Q06210 699 aaPredicted RBP19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 SLC12A1Q13621 1099 aa19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 AUHQ13825 339 aaKnown RBP19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 PLEKHG6Q3KR16 790 aa19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 XYLT1Q86Y38 959 aa19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 CCAR2Q8N163 923 aaKnown RBP19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 MSANTD4Q8NCY6 345 aa19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 PGAP3Q96FM1 320 aaPredicted RBP19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 CAPN10Q9HC96 672 aa19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 TMEM51Q9NW97 253 aa19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 STAP1Q9ULZ2 295 aa19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 ERVW-1Q9UQF0 538 aa19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 SIK3Q9Y2K2 1263 aa19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 HS3ST4Q9Y661 456 aa19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 PLXND1Q9Y4D7 1925 aa19.01■□□□□ 0.63
PRPF40A-209ENST00000486100 METTL12A8MUP2 240 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 EPHB6O15197 1021 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 GFPT2O94808 682 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 F9P00740 461 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 MAOBP27338 520 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 SOX5P35711 763 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 CXCR3P49682 368 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 JAM2P57087 298 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 RPS14P62263 151 aaKnown RBP19■□□□□ 0.63
PRPF40A-209ENST00000486100 NOMO3P69849 1222 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 ECT2LQ008S8 904 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 ARID5BQ14865 1188 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 NCAPHQ15003 741 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 HNRNPA1L2Q32P51 320 aaKnown RBP19■□□□□ 0.63
PRPF40A-209ENST00000486100 FAM102AQ5T9C2 384 aaPredicted RBP19■□□□□ 0.63
PRPF40A-209ENST00000486100 OTUD1Q5VV17 481 aaPredicted RBP19■□□□□ 0.63
PRPF40A-209ENST00000486100 CACUL1Q86Y37 369 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 APCDD1Q8J025 514 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 CPA5Q8WXQ8 436 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 DNASE2BQ8WZ79 361 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 IGSF8Q969P0 613 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 RPRD1AQ96P16 312 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms