RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 OXCT1P55809 520 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 CENPCQ03188 943 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
PTCD1-205ENST00000485746 SPEM2Q0P670 501 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 EIF4EBP2Q13542 120 aaPredicted RBP12.92□□□□□ -0.34
PTCD1-205ENST00000485746 ARL13BQ3SXY8 428 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 PLK5Q496M5 336 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 TDRD12Q587J7 1177 aaKnown RBP12.92□□□□□ -0.34
PTCD1-205ENST00000485746 TMEM215Q68D42 235 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 KIAA1211LQ6NV74 962 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 DCUN1D2Q6PH85 259 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 LRSAM1Q6UWE0 723 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 ARCQ7LC44 396 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 ADIPOR2Q86V24 386 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 FAM131BQ86XD5 332 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 PHF13Q86YI8 300 aaPredicted RBP12.92□□□□□ -0.34
PTCD1-205ENST00000485746 CCAR2Q8N163 923 aaKnown RBP12.92□□□□□ -0.34
PTCD1-205ENST00000485746 PGAP3Q96FM1 320 aaPredicted RBP12.92□□□□□ -0.34
PTCD1-205ENST00000485746 LOXL4Q96JB6 756 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 PRMT1Q99873 361 aaKnown RBP12.92□□□□□ -0.34
PTCD1-205ENST00000485746 ARRDC1-AS1Q9H2J1 176 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 HAUS4Q9H6D7 363 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 ARHGEF38Q9NXL2 777 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 SUN2Q9UH99 717 aa12.92□□□□□ -0.34
PTCD1-205ENST00000485746 A0A1B0GVM2 712 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 TCAF2A6NFQ2 919 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 SRGAP2O75044 1071 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 NDUFS2O75306 463 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 ZNF217O75362 1048 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 SKILP12757 684 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 HLA-EP13747 358 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 NDUFV2P19404 249 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 GPD1P21695 349 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 PRKCHP24723 683 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 GGCXP38435 758 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 NNMTP40261 264 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 DHPSP49366 369 aaPredicted RBP12.91□□□□□ -0.34
PTCD1-205ENST00000485746 C15orf59Q2T9L4 293 aaPredicted RBP12.91□□□□□ -0.34
PTCD1-205ENST00000485746 FUT11Q495W5 492 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 PITRM1Q5JRX3 1037 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 ACBD5Q5T8D3 534 aaPredicted RBP12.91□□□□□ -0.34
PTCD1-205ENST00000485746 SLC36A4Q6YBV0 504 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 LPCAT2Q7L5N7 544 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 KIAA0907Q7Z7F0 614 aaPredicted RBP12.91□□□□□ -0.34
PTCD1-205ENST00000485746 C14orf80Q86SX3 495 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 VPS36Q86VN1 386 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 MCOLN2Q8IZK6 566 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 RNF214Q8ND24 703 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 C3orf20Q8ND61 904 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 JOSD2Q8TAC2 188 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 PRCCQ92733 491 aaPredicted RBP12.91□□□□□ -0.34
PTCD1-205ENST00000485746 IGSF8Q969P0 613 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 NT5C3BQ969T7 300 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 IQCDQ96DY2 449 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 SIPA1Q96FS4 1042 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTCD1-205ENST00000485746 SLC6A17Q9H1V8 727 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 PRDM16Q9HAZ2 1276 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 AIPL1Q9NZN9 384 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 CALCOCO1Q9P1Z2 691 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 CYP8B1Q9UNU6 501 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTCD1-205ENST00000485746 SNX10Q9Y5X0 201 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 MYOFQ9NZM1 2061 aa12.91□□□□□ -0.34
PTCD1-205ENST00000485746 SIGLEC16A6NMB1 481 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 CLDN11O75508 207 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 BCKDHBP21953 392 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 P2RY2P41231 377 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 NUMBP49757 651 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 CDH4P55283 916 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 ECT2LQ008S8 904 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 CREB5Q02930 508 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 PTP4A2Q12974 167 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 SLC12A1Q13621 1099 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 CCDC14Q49A88 953 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 FSCBQ5H9T9 825 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 FIGNQ5HY92 759 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 OTUD1Q5VV17 481 aaPredicted RBP12.9□□□□□ -0.34
PTCD1-205ENST00000485746 SCYL2Q6P3W7 929 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 MON1BQ7L1V2 547 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 TMPRSS6Q8IU80 811 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 PIAS4Q8N2W9 510 aaPredicted RBP12.9□□□□□ -0.34
PTCD1-205ENST00000485746 ZNF366Q8N895 744 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 C12orf50Q8NA57 414 aaPredicted RBP12.9□□□□□ -0.34
PTCD1-205ENST00000485746 OLIG1Q8TAK6 271 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 FAM172AQ8WUF8 416 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 TTC17Q96AE7 1141 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 ZC3H10Q96K80 434 aaKnown RBP12.9□□□□□ -0.34
PTCD1-205ENST00000485746 MCEEQ96PE7 176 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 HAPLN3Q96S86 360 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 MUC3BQ9H195 1237 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 DUSP15Q9H1R2 295 aaPredicted RBP12.9□□□□□ -0.34
PTCD1-205ENST00000485746 ERVW-1Q9UQF0 538 aa12.9□□□□□ -0.34
PTCD1-205ENST00000485746 LUC7L2Q9Y383 392 aaKnown RBP12.9□□□□□ -0.34
PTCD1-205ENST00000485746 BZW2Q9Y6E2 419 aaKnown RBP12.9□□□□□ -0.34
PTCD1-205ENST00000485746 ATG2BQ96BY7 2078 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 A0A1W2PQJ5 194 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 C2CD4BA6NLJ0 364 aa12.89□□□□□ -0.35
PTCD1-205ENST00000485746 E9PAM4 449 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms