RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 MOCS3O95396 460 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 SEMA4FO95754 770 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 ZNF883P0CG24 379 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 CSKP41240 450 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 YWHAZP63104 245 aaKnown RBP17.76■□□□□ 0.43
SMC4-216ENST00000485645 DCAF6Q58WW2 860 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 TRIM65Q6PJ69 517 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 CFAP52Q8N1V2 620 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 CHCHD4Q8N4Q1 142 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 MYO19Q96H55 970 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 RSPH9Q9H1X1 276 aaPredicted RBP17.76■□□□□ 0.43
SMC4-216ENST00000485645 THAP9Q9H5L6 903 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 IL21RQ9HBE5 538 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 ACP6Q9NPH0 428 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 KIAA1468Q9P260 1216 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 TJP2Q9UDY2 1190 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 CYTH4Q9UIA0 394 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 KLK13Q9UKR3 277 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 INTS6Q9UL03 887 aaKnown RBP17.76■□□□□ 0.43
SMC4-216ENST00000485645 NCKAP1Q9Y2A7 1128 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.76■□□□□ 0.43
SMC4-216ENST00000485645 ASPMQ8IZT6 3477 aa17.76■□□□□ 0.43
SMC4-216ENST00000485645 ZFHX4Q86UP3 3567 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 A0A1B0GVT2 93 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 RNASEH1O60930 286 aaKnown RBP17.75■□□□□ 0.43
SMC4-216ENST00000485645 LUC7L3O95232 432 aaKnown RBP17.75■□□□□ 0.43
SMC4-216ENST00000485645 TRUB2O95900 331 aaKnown RBP17.75■□□□□ 0.43
SMC4-216ENST00000485645 USP8P40818 1118 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 CSNK1EP49674 416 aaKnown RBP17.75■□□□□ 0.43
SMC4-216ENST00000485645 AFF3P51826 1226 aaKnown RBP17.75■□□□□ 0.43
SMC4-216ENST00000485645 BNC1Q01954 994 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 CAMK4Q16566 473 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 ARHGAP44Q17R89 818 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 HLA-BQ31612 363 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 HNRNPA1L2Q32P51 320 aaKnown RBP17.75■□□□□ 0.43
SMC4-216ENST00000485645 ZC3H12AQ5D1E8 599 aaKnown RBP17.75■□□□□ 0.43
SMC4-216ENST00000485645 FSCBQ5H9T9 825 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 PITRM1Q5JRX3 1037 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 GJB7Q6PEY0 223 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 GBP6Q6ZN66 633 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 CHSY1Q86X52 802 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 LGI2Q8N0V4 545 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 KDM1BQ8NB78 822 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 SETD7Q8WTS6 366 aaKnown RBP17.75■□□□□ 0.43
SMC4-216ENST00000485645 BTN2A3PQ96KV6 586 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 MTG2Q9H4K7 406 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 TM7SF3Q9NS93 570 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 KIAA1522Q9P206 1035 aaPredicted RBP17.75■□□□□ 0.43
SMC4-216ENST00000485645 SLC12A6Q9UHW9 1150 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 XPO7Q9UIA9 1087 aaKnown RBP17.75■□□□□ 0.43
SMC4-216ENST00000485645 SCML1Q9UN30 329 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 CFAP47Q6ZTR5 3102 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 IGF2RP11717 2491 aa17.75■□□□□ 0.43
SMC4-216ENST00000485645 SIN3BO75182 1162 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 FSBPO95073 299 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 SRPRAP08240 638 aaKnown RBP17.74■□□□□ 0.43
SMC4-216ENST00000485645 SLC9A1P19634 815 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 TACR2P21452 398 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 SFSWAPQ12872 951 aaKnown RBP17.74■□□□□ 0.43
SMC4-216ENST00000485645 PDCLQ13371 301 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 TEAD4Q15561 434 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 RAP1GAP2Q684P5 730 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 MMS22LQ6ZRQ5 1243 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 USP30Q70CQ3 517 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 RAB44Q7Z6P3 723 aaPredicted RBP17.74■□□□□ 0.43
SMC4-216ENST00000485645 DHX40Q8IX18 779 aaKnown RBP17.74■□□□□ 0.43
SMC4-216ENST00000485645 ATP6V0D2Q8N8Y2 350 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 GANCQ8TET4 914 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 BIRC7Q96CA5 298 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 MRGPRX3Q96LB0 322 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 PABPC3Q9H361 631 aaKnown RBP17.74■□□□□ 0.43
SMC4-216ENST00000485645 OSGEPQ9NPF4 335 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.74■□□□□ 0.43
SMC4-216ENST00000485645 APEX2Q9UBZ4 518 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 ERVW-1Q9UQF0 538 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 FNDC3AQ9Y2H6 1198 aaKnown RBP17.74■□□□□ 0.43
SMC4-216ENST00000485645 CEP83Q9Y592 693 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 SLCO1B1Q9Y6L6 691 aa17.74■□□□□ 0.43
SMC4-216ENST00000485645 TARSL2A2RTX5 802 aaKnown RBP17.73■□□□□ 0.43
SMC4-216ENST00000485645 BECN2A8MW95 431 aa17.73■□□□□ 0.43
SMC4-216ENST00000485645 CBFA2T3O75081 653 aa17.73■□□□□ 0.43
SMC4-216ENST00000485645 IGLV3-25P01717 112 aa17.73■□□□□ 0.43
SMC4-216ENST00000485645 FTH1P19P0C7X4 201 aa17.73■□□□□ 0.43
SMC4-216ENST00000485645 CD27P26842 260 aa17.73■□□□□ 0.43
SMC4-216ENST00000485645 ANP32AP39687 249 aaKnown RBP17.73■□□□□ 0.43
SMC4-216ENST00000485645 UBE2HP62256 183 aa17.73■□□□□ 0.43
SMC4-216ENST00000485645 ARID5BQ14865 1188 aa17.73■□□□□ 0.43
SMC4-216ENST00000485645 TAF5Q15542 800 aa17.73■□□□□ 0.43
SMC4-216ENST00000485645 EXOC3L4Q17RC7 722 aa17.73■□□□□ 0.43
SMC4-216ENST00000485645 RNF219Q5W0B1 726 aaPredicted RBP17.73■□□□□ 0.43
SMC4-216ENST00000485645 TM9SF3Q9HD45 589 aa17.73■□□□□ 0.43
SMC4-216ENST00000485645 FBXL12Q9NXK8 326 aa17.73■□□□□ 0.43
SMC4-216ENST00000485645 PCOLCE2Q9UKZ9 415 aa17.73■□□□□ 0.43
SMC4-216ENST00000485645 PCDHGB2Q9Y5G2 931 aa17.73■□□□□ 0.43
SMC4-216ENST00000485645 AKAP13Q12802 2813 aa17.73■□□□□ 0.43
SMC4-216ENST00000485645 CABIN1Q9Y6J0 2220 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 EDDM13A0A1B0GTR0 161 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 FAM221BA6H8Z2 402 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 TTC34A8MYJ7 566 aa17.72■□□□□ 0.43
SMC4-216ENST00000485645 KCNU1A8MYU2 1149 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 273.3 ms