RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	CLEC4C	Q8WTT0	213 aa		13.76	□□□□□ -0.21
UBA3-210	ENST00000485424	FAM81B	Q96LP2	452 aa		13.76	□□□□□ -0.21
UBA3-210	ENST00000485424	INTS2	Q9H0H0	1204 aa	Known RBP	13.76	□□□□□ -0.21
UBA3-210	ENST00000485424	IL21R	Q9HBE5	538 aa		13.76	□□□□□ -0.21
UBA3-210	ENST00000485424	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.76	□□□□□ -0.21
UBA3-210	ENST00000485424	CEP83	Q9Y592	693 aa		13.76	□□□□□ -0.21
UBA3-210	ENST00000485424	DOCK4	Q8N1I0	1966 aa		13.76	□□□□□ -0.21
UBA3-210	ENST00000485424	GOLGA6L7	A0A1B0GV03	622 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	METTL12	A8MUP2	240 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	BCAT2	O15382	392 aa	Predicted RBP	13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	THAP12	O43422	761 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	RNASEH1	O60930	286 aa	Known RBP	13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	LETM1	O95202	739 aa	Predicted RBP	13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	CER1	O95813	267 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	MOCS2	O96007	188 aa	Predicted RBP	13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	CALCA	P01258	141 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	DLD	P09622	509 aa	Known RBP	13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	USP8	P40818	1118 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	BNC1	Q01954	994 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	SCAP	Q12770	1279 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	CAMK2G	Q13555	558 aa	Predicted RBP	13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	PIK3R6	Q5UE93	754 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	IL27RA	Q6UWB1	636 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	LRSAM1	Q6UWE0	723 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	ENOSF1	Q7L5Y1	443 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	GLRX5	Q86SX6	157 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	TRIM59	Q8IWR1	403 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	ZNF366	Q8N895	744 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	GANC	Q8TET4	914 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	TJP2	Q9UDY2	1190 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	PCOLCE2	Q9UKZ9	415 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	NCKAP1	Q9Y2A7	1128 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	TLR6	Q9Y2C9	796 aa		13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.75	□□□□□ -0.21
UBA3-210	ENST00000485424	KALRN	O60229	2985 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	IGLV3-27	P01718	113 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	ZNF883	P0CG24	379 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	GNA15	P30679	374 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	MATK	P42679	507 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	SGSH	P51688	502 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	SFSWAP	Q12872	951 aa	Known RBP	13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	TEAD4	Q15561	434 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	TPD52L1	Q16890	204 aa	Predicted RBP	13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	RNF219	Q5W0B1	726 aa	Predicted RBP	13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	ZNF776	Q68DI1	518 aa	Predicted RBP	13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	ADIPOR2	Q86V24	386 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	SCUBE3	Q8IX30	993 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	C1orf216	Q8TAB5	229 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	LMO3	Q8TAP4	145 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	BAHD1	Q8TBE0	780 aa	Predicted RBP	13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	DQX1	Q8TE96	717 aa	Known RBP	13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	AZIN2	Q96A70	460 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	MED15	Q96RN5	788 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	BTBD1	Q9H0C5	482 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	PCED1A	Q9H1Q7	454 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	TMEM245	Q9H330	911 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	GAREM1	Q9H706	876 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	SLC12A6	Q9UHW9	1150 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	EIF2B4	Q9UI10	523 aa	Known RBP	13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	SLCO1B1	Q9Y6L6	691 aa		13.74	□□□□□ -0.21
UBA3-210	ENST00000485424	ASL	P04424	464 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	SLC6A4	P31645	630 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	CD70	P32970	193 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	NNMT	P40261	264 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	MARS	P56192	900 aa	Known RBP	13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	ZBTB16	Q05516	673 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	NNT	Q13423	1086 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	ARHGAP44	Q17R89	818 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	HLA-B	Q31612	363 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	ADAT2	Q7Z6V5	191 aa	Known RBP	13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	SLCO6A1	Q86UG4	719 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	CHSY1	Q86X52	802 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	ATP6V0D2	Q8N8Y2	350 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	FIBIN	Q8TAL6	211 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	ADAM32	Q8TC27	787 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	SETD7	Q8WTS6	366 aa	Known RBP	13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	RNF34	Q969K3	372 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	ZSWIM1	Q9BR11	485 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	POPDC2	Q9HBU9	364 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	TM7SF3	Q9NS93	570 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	NAALADL1	Q9UQQ1	740 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	APOBEC2	Q9Y235	224 aa	Known RBP	13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	GPSM3	Q9Y4H4	160 aa		13.73	□□□□□ -0.21
UBA3-210	ENST00000485424	GADD45B	O75293	160 aa	Predicted RBP	13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	SEMA4F	O95754	770 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	BMP6	P22004	513 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	GPD2	P43304	727 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	MTIF2	P46199	727 aa	Known RBP	13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	AFF3	P51826	1226 aa	Known RBP	13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	SNX16	P57768	344 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	FAM133B	Q5BKY9	247 aa	Known RBP	13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	DENND1B	Q6P3S1	775 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	GBP6	Q6ZN66	633 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	TAC4	Q86UU9	113 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	LGI2	Q8N0V4	545 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	WFDC5	Q8TCV5	224 aa		13.72	□□□□□ -0.21
UBA3-210	ENST00000485424	STK32A	Q8WU08	396 aa		13.72	□□□□□ -0.21

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