RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 FIGNQ5HY92 759 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 DCAF12L1Q5VU92 463 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 BSPRYQ5W0U4 402 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 PPP1R2P3Q6NXS1 205 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 MSANTD2Q6P1R3 559 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 TRIM72Q6ZMU5 477 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 BHLHA9Q7RTU4 235 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 SLC47A2Q86VL8 602 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 CACUL1Q86Y37 369 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 C1orf131Q8NDD1 294 aaKnown RBP10.4□□□□□ -0.74
CPSF4-213ENST00000484112 PLD4Q96BZ4 506 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 LRIG1Q96JA1 1093 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 PPP1R13BQ96KQ4 1090 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 NUP58Q9BVL2 599 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 ZDHHC5Q9C0B5 715 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 PDCL3Q9H2J4 239 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 ST7Q9NRC1 585 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 WSB2Q9NYS7 404 aaPredicted RBP10.4□□□□□ -0.74
CPSF4-213ENST00000484112 MARK1Q9P0L2 795 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 MARCH2Q9P0N8 246 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 AJAP1Q9UKB5 411 aaPredicted RBP10.4□□□□□ -0.74
CPSF4-213ENST00000484112 PCOLCE2Q9UKZ9 415 aa10.4□□□□□ -0.74
CPSF4-213ENST00000484112 ADAMTS20P59510 1910 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 EIF4E1BA6NMX2 242 aaKnown RBP10.39□□□□□ -0.75
CPSF4-213ENST00000484112 YJEFN3A6XGL0 299 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 E7ENQ6 273 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 SYNCRIPO60506 623 aaKnown RBP10.39□□□□□ -0.75
CPSF4-213ENST00000484112 LTFP02788 710 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 HMBSP08397 361 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 CHKAP35790 457 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 MATKP42679 507 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 IL12RB1P42701 662 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 RGS7P49802 495 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 CDR2Q01850 454 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 NR1I3Q14994 352 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 CCDC157Q569K6 752 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 EFHC1Q5JVL4 640 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 DENND1BQ6P3S1 775 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 FAM124AQ86V42 546 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 LUZP1Q86V48 1076 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 MARCH9Q86YJ5 346 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 TMPRSS6Q8IU80 811 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 EPS8L1Q8TE68 723 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 RHBDD1Q8TEB9 315 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 DNASE2BQ8WZ79 361 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 SNX19Q92543 992 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 AZIN2Q96A70 460 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 SIPA1Q96FS4 1042 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 MKRN2Q9H000 416 aaKnown RBP10.39□□□□□ -0.75
CPSF4-213ENST00000484112 NUCKS1Q9H1E3 243 aaKnown RBP10.39□□□□□ -0.75
CPSF4-213ENST00000484112 TSPY26PQ9H489 355 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 POPDC2Q9HBU9 364 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 ITM2CQ9NQX7 267 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 TM7SF3Q9NS93 570 aa10.39□□□□□ -0.75
CPSF4-213ENST00000484112 EIF2B4Q9UI10 523 aaKnown RBP10.39□□□□□ -0.75
CPSF4-213ENST00000484112 ASPMQ8IZT6 3477 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 METTL12A8MUP2 240 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 E5RJQ4 531 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 BCAT2O15382 392 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-213ENST00000484112 HSF2BPO75031 334 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 CBFA2T3O75081 653 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 GABBR2O75899 941 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 STC2O76061 302 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 CER1O95813 267 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 ATXN1LP0C7T5 689 aaKnown RBP10.38□□□□□ -0.75
CPSF4-213ENST00000484112 ACADMP11310 421 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 FERP16591 822 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 GABRB2P47870 512 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 HARS2P49590 506 aaKnown RBP10.38□□□□□ -0.75
CPSF4-213ENST00000484112 TPMTP51580 245 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 YWHAZP63104 245 aaKnown RBP10.38□□□□□ -0.75
CPSF4-213ENST00000484112 FANCCQ00597 558 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 EFEMP1Q12805 493 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 TRIP4Q15650 581 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-213ENST00000484112 GEN1Q17RS7 908 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 HLA-BQ31612 363 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 NUGGCQ68CJ6 796 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 IL27RAQ6UWB1 636 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 Q6ZNB5 142 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 ARCQ7LC44 396 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 UNC45BQ8IWX7 931 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 SCUBE3Q8IX30 993 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 CPXM2Q8N436 756 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 WDTC1Q8N5D0 677 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 ZNF397Q8NF99 534 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-213ENST00000484112 UCMAQ8WVF2 138 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 PRCCQ92733 491 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-213ENST00000484112 SERPINB11Q96P15 392 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 SYNCQ9H7C4 482 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 ACP6Q9NPH0 428 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 RRN3Q9NYV6 651 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 USP36Q9P275 1121 aaKnown RBP10.38□□□□□ -0.75
CPSF4-213ENST00000484112 RASAL2Q9UJF2 1139 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 STOML2Q9UJZ1 356 aa10.38□□□□□ -0.75
CPSF4-213ENST00000484112 NOCTQ9UK39 431 aaKnown RBP10.38□□□□□ -0.75
CPSF4-213ENST00000484112 FNDC3AQ9Y2H6 1198 aaKnown RBP10.38□□□□□ -0.75
CPSF4-213ENST00000484112 LAMA1P25391 3075 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 A0A1B0GVT2 93 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 A0A1W2PQJ5 194 aa10.37□□□□□ -0.75
CPSF4-213ENST00000484112 CAPN9O14815 690 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms