RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 SLC6A17Q9H1V8 727 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 ITM2CQ9NQX7 267 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 ABCB8Q9NUT2 735 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 GGA2Q9UJY4 613 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 SLC6A14Q9UN76 642 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 GOLGA6L7A0A1B0GV03 622 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 BECN2A8MW95 431 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 PAPSS1O43252 624 aaPredicted RBP13.27□□□□□ -0.29
COL21A1-209ENST00000482933 APOEP02649 317 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 CFIP05156 583 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 SERPINF2P08697 491 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 ENGP17813 658 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 POLR2EP19388 210 aaKnown RBP13.27□□□□□ -0.29
COL21A1-209ENST00000482933 PRKCHP24723 683 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 SLC6A4P31645 630 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 SNX16P57768 344 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 YWHAZP63104 245 aaKnown RBP13.27□□□□□ -0.29
COL21A1-209ENST00000482933 GFPT1Q06210 699 aaPredicted RBP13.27□□□□□ -0.29
COL21A1-209ENST00000482933 PDCLQ13371 301 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 FNDC3BQ53EP0 1204 aaKnown RBP13.27□□□□□ -0.29
COL21A1-209ENST00000482933 CT47A1Q5JQC4 288 aaPredicted RBP13.27□□□□□ -0.29
COL21A1-209ENST00000482933 WDR45BQ5MNZ6 344 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 MBLAC2Q68D91 279 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 RFWD3Q6PCD5 774 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 TAC4Q86UU9 113 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 ADIPOR2Q86V24 386 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 SLC41A1Q8IVJ1 513 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 MFN1Q8IWA4 741 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 RGL4Q8IZJ4 473 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 OR2T3Q8NH03 318 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 SHC3Q92529 594 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 SLC39A13Q96H72 371 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 HSPA12BQ96MM6 686 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 NOX5Q96PH1 765 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 FBRSQ9HAH7 460 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 WSB2Q9NYS7 404 aaPredicted RBP13.27□□□□□ -0.29
COL21A1-209ENST00000482933 USP36Q9P275 1121 aaKnown RBP13.27□□□□□ -0.29
COL21A1-209ENST00000482933 SUSD2Q9UGT4 822 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 SLC12A6Q9UHW9 1150 aa13.27□□□□□ -0.29
COL21A1-209ENST00000482933 GLI1P08151 1106 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 DLDP09622 509 aaKnown RBP13.26□□□□□ -0.29
COL21A1-209ENST00000482933 GNSP15586 552 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 NOVA1P51513 510 aaKnown RBP13.26□□□□□ -0.29
COL21A1-209ENST00000482933 SGSHP51688 502 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 COPAP53621 1224 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 UAP1L1Q3KQV9 507 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 VWA3BQ502W6 1294 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 MS4A13Q5J8X5 152 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 N4BP2L1Q5TBK1 243 aaPredicted RBP13.26□□□□□ -0.29
COL21A1-209ENST00000482933 SYPL2Q5VXT5 272 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 NADSYN1Q6IA69 706 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 LYPD8Q6UX82 237 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 CADM4Q8NFZ8 388 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 FIBINQ8TAL6 211 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 ADAM32Q8TC27 787 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 CYB5D2Q8WUJ1 264 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 TOE1Q96GM8 510 aaKnown RBP13.26□□□□□ -0.29
COL21A1-209ENST00000482933 LHX5Q9H2C1 402 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 TMEM245Q9H330 911 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 NDST4Q9H3R1 872 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 ACP6Q9NPH0 428 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 CD93Q9NPY3 652 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 ASNSD1Q9NWL6 643 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 STIM2Q9P246 746 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 TJP2Q9UDY2 1190 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 SUN2Q9UH99 717 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 CYTH4Q9UIA0 394 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 DNAJC12Q9UKB3 198 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 CEP83Q9Y592 693 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 WASF2Q9Y6W5 498 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 CKAP5Q14008 2032 aa13.26□□□□□ -0.29
COL21A1-209ENST00000482933 TRUB2O95900 331 aaKnown RBP13.25□□□□□ -0.29
COL21A1-209ENST00000482933 MOCS2O96007 188 aaPredicted RBP13.25□□□□□ -0.29
COL21A1-209ENST00000482933 SYPP08247 313 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 HLA-EP13747 358 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 CSRP1P21291 193 aaKnown RBP13.25□□□□□ -0.29
COL21A1-209ENST00000482933 CD70P32970 193 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 KRT9P35527 623 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 MAPK8P45983 427 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 TPMTP51580 245 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 BPIFB4P59827 614 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 CAMK2GQ13555 558 aaPredicted RBP13.25□□□□□ -0.29
COL21A1-209ENST00000482933 CDH18Q13634 790 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 DPCR1Q3MIW9 517 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 EFHC1Q5JVL4 640 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 PSAPL1Q6NUJ1 521 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 CARNMT1Q8N4J0 409 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 HDDC3Q8N4P3 179 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 ATP6V0D2Q8N8Y2 350 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 PPP1R13BQ96KQ4 1090 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 BTN2A3PQ96KV6 586 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 TUBGCP2Q9BSJ2 902 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 NUP58Q9BVL2 599 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 NUCKS1Q9H1E3 243 aaKnown RBP13.25□□□□□ -0.29
COL21A1-209ENST00000482933 CAPN10Q9HC96 672 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.25□□□□□ -0.29
COL21A1-209ENST00000482933 NFE2L3Q9Y4A8 694 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 PI4KAP42356 2102 aa13.25□□□□□ -0.29
COL21A1-209ENST00000482933 MEI4A8MW99 385 aa13.24□□□□□ -0.29
COL21A1-209ENST00000482933 KCNJ18B7U540 433 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms