RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 SLC18A3Q16572 532 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 SH3PXD2AQ5TCZ1 1133 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 CHST9Q7L1S5 443 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 CCDC33Q8N5R6 958 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 ATRIPQ8WXE1 791 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 NTAN1Q96AB6 310 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 CIPCQ9C0C6 399 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 ANLNQ9NQW6 1124 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 C2orf42Q9NWW7 574 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 KIAA1522Q9P206 1035 aaPredicted RBP17.13■□□□□ 0.33
HMGN1-214ENST00000482733 VANGL2Q9ULK5 521 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 MUC6Q6W4X9 2439 aa17.13■□□□□ 0.33
HMGN1-214ENST00000482733 TMEM191CA6NGB0 347 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 CCP110O43303 1012 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 ATMINO43313 823 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-214ENST00000482733 AKR1B10O60218 316 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 CLDN11O75508 207 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 ALDH1A2O94788 518 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 MOCS3O95396 460 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 APBB3O95704 486 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 ATP5BP06576 529 aaKnown RBP17.12■□□□□ 0.33
HMGN1-214ENST00000482733 ADRA1BP35368 520 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 NBL1P41271 181 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 AIF1P55008 147 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 CDH4P55283 916 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 SLC12A1Q13621 1099 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 CRY1Q16526 586 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 EGFLAMQ63HQ2 1017 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 LONP2Q86WA8 852 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 CHPFQ8IZ52 775 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 CCAR2Q8N163 923 aaKnown RBP17.12■□□□□ 0.33
HMGN1-214ENST00000482733 ZBTB44Q8NCP5 570 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 TSTD1Q8NFU3 115 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 CCDC42Q96M95 316 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 PPP1R9BQ96SB3 815 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 NCAPGQ9BPX3 1015 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 OSBPL2Q9H1P3 480 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 SEMA4AQ9H3S1 761 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 POLMQ9NP87 494 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-214ENST00000482733 THAP10Q9P2Z0 257 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-214ENST00000482733 MYO1AQ9UBC5 1043 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 HCN2Q9UL51 889 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 KIAA1549LQ6ZVL6 1849 aa17.12■□□□□ 0.33
HMGN1-214ENST00000482733 MYOFQ9NZM1 2061 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-214ENST00000482733 ANTXRLA6NF34 631 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 DRGXA6NNA5 263 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 I6L893 689 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-214ENST00000482733 SGK1O00141 431 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 POLR2EP19388 210 aaKnown RBP17.11■□□□□ 0.33
HMGN1-214ENST00000482733 PSMA2P25787 234 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 CD70P32970 193 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 NRG1Q02297 640 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-214ENST00000482733 GFPT1Q06210 699 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-214ENST00000482733 SCAPQ12770 1279 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 LMAN2Q12907 356 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 ZNF177Q13360 481 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-214ENST00000482733 ASTE1Q2TB18 679 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-214ENST00000482733 C14orf80Q86SX3 495 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 ADIPOR2Q86V24 386 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 DNAAF5Q86Y56 855 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 WFDC5Q8TCV5 224 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 IGSF8Q969P0 613 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 LMLNQ96KR4 655 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 GABRG3Q99928 467 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 RETREG1Q9H6L5 497 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 EBF1Q9UH73 591 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 NENFQ9UMX5 172 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 PLA2G4CQ9UP65 541 aa17.11■□□□□ 0.33
HMGN1-214ENST00000482733 IGLV3-10A0A075B6K4 115 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 E9PAM4 449 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 ZBTB24O43167 697 aaPredicted RBP17.1■□□□□ 0.33
HMGN1-214ENST00000482733 ADAM23O75077 832 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 RNF8O76064 485 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 ASLP04424 464 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 CYP1A2P05177 515 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 HOXB2P14652 356 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 CNR2P34972 360 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 OGDHQ02218 1023 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 ACAP1Q15027 740 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 TMEM215Q68D42 235 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 MBLAC2Q68D91 279 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 SCYL2Q6P3W7 929 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 SLFN11Q7Z7L1 901 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 WDR5BQ86VZ2 330 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 ZNF683Q8IZ20 524 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 TTC17Q96AE7 1141 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 HHIPQ96QV1 700 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 THAP2Q9H0W7 228 aa17.1■□□□□ 0.33
HMGN1-214ENST00000482733 NHEJ1Q9H9Q4 299 aaPredicted RBP17.1■□□□□ 0.33
HMGN1-214ENST00000482733 PPARGC1AQ9UBK2 798 aaKnown RBP17.1■□□□□ 0.33
HMGN1-214ENST00000482733 LILRB5O75023 590 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 SRGAP2O75044 1071 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 DLDP09622 509 aaKnown RBP17.09■□□□□ 0.33
HMGN1-214ENST00000482733 GGCXP38435 758 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 FNTBP49356 437 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 GALCP54803 685 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 ENPP2Q13822 863 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 STARD3Q14849 445 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 FUT11Q495W5 492 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms