RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 HOXC6P09630 235 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 YWHAEP62258 255 aaKnown RBP14.67□□□□□ -0.06
COL9A2-207ENST00000482722 TAP1Q03518 808 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 PDK1Q15118 436 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 SLC44A4Q53GD3 710 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 RARS2Q5T160 578 aaKnown RBP14.67□□□□□ -0.06
COL9A2-207ENST00000482722 FAM102AQ5T9C2 384 aaPredicted RBP14.67□□□□□ -0.06
COL9A2-207ENST00000482722 MPP5Q8N3R9 675 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 NIPA2Q8N8Q9 360 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 DNERQ8NFT8 737 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 DDI1Q8WTU0 396 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 SLC10A4Q96EP9 437 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 ANKRD36BP1Q96IX9 119 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 LRGUKQ96M69 825 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 XYLT2Q9H1B5 865 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 PIH1D1Q9NWS0 290 aaKnown RBP14.67□□□□□ -0.06
COL9A2-207ENST00000482722 M0QYV0 167 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 MAFO75444 373 aaPredicted RBP14.67□□□□□ -0.06
COL9A2-207ENST00000482722 MTA1Q13330 715 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 KCTD2Q14681 263 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 ZNF667Q5HYK9 610 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 FAM160B1Q5W0V3 765 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 SCYL2Q6P3W7 929 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 GALNT4Q8N4A0 578 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 SPATA33Q96N06 139 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 PEBP4Q96S96 227 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 FRMD8P1Q9BZ68 369 aaPredicted RBP14.67□□□□□ -0.06
COL9A2-207ENST00000482722 ZNF518BQ9C0D4 1074 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 RNPEPQ9H4A4 650 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 POPDC2Q9HBU9 364 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 RNF19AQ9NV58 838 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 FAIMQ9NVQ4 179 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 GPATCH2LQ9NWQ4 482 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 CPSF3Q9UKF6 684 aaKnown RBP14.67□□□□□ -0.06
COL9A2-207ENST00000482722 PAIP2BQ9ULR5 123 aaKnown RBP14.67□□□□□ -0.06
COL9A2-207ENST00000482722 USP18Q9UMW8 372 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 EFR3BQ9Y2G0 817 aa14.67□□□□□ -0.06
COL9A2-207ENST00000482722 E9PBE3 544 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 KRT38O76015 456 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 FGF3P11487 239 aaPredicted RBP14.66□□□□□ -0.06
COL9A2-207ENST00000482722 CD97P48960 835 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 CLCN3P51790 818 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 EFNA5P52803 228 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 MRPS22P82650 360 aaKnown RBP14.66□□□□□ -0.06
COL9A2-207ENST00000482722 TARBP2Q15633 366 aaKnown RBP14.66□□□□□ -0.06
COL9A2-207ENST00000482722 USP41Q3LFD5 358 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 CAND1Q86VP6 1230 aaKnown RBP14.66□□□□□ -0.06
COL9A2-207ENST00000482722 BBS5Q8N3I7 341 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 TMIGD2Q96BF3 282 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 KCNK16Q96T55 309 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 PCDH18Q9HCL0 1135 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 TUBGCP4Q9UGJ1 667 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 FAF1Q9UNN5 650 aaPredicted RBP14.66□□□□□ -0.06
COL9A2-207ENST00000482722 DCXO43602 365 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 ZNF189O75820 626 aaPredicted RBP14.66□□□□□ -0.06
COL9A2-207ENST00000482722 ITGB3P05106 788 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 NFICP08651 508 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 TXNP10599 105 aaKnown RBP14.66□□□□□ -0.06
COL9A2-207ENST00000482722 CD1EP15812 388 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 PRKCHP24723 683 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 RBL1P28749 1068 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 GRIA1P42261 906 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 STT3AP46977 705 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 AP3M2P53677 418 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 ADGRE1Q14246 886 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 C15orf59Q2T9L4 293 aaPredicted RBP14.66□□□□□ -0.06
COL9A2-207ENST00000482722 UNC5AQ6ZN44 842 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 SMYD1Q8NB12 490 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 ADPGKQ9BRR6 497 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 SDCBP2Q9H190 292 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 COPS7BQ9H9Q2 264 aaPredicted RBP14.66□□□□□ -0.06
COL9A2-207ENST00000482722 NR2E3Q9Y5X4 410 aa14.66□□□□□ -0.06
COL9A2-207ENST00000482722 COX4I1P13073 169 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 OSBPP22059 807 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 MSX2P35548 267 aaPredicted RBP14.65□□□□□ -0.06
COL9A2-207ENST00000482722 ATF7IP2Q5U623 682 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 XYLT1Q86Y38 959 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.65□□□□□ -0.06
COL9A2-207ENST00000482722 SEPT1Q8WYJ6 367 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 HEXIM2Q96MH2 286 aaKnown RBP14.65□□□□□ -0.06
COL9A2-207ENST00000482722 STN1Q9H668 368 aaKnown RBP14.65□□□□□ -0.06
COL9A2-207ENST00000482722 INIPQ9NRY2 104 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 THEGQ9P2T0 379 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 RSL24D1Q9UHA3 163 aaKnown RBP14.65□□□□□ -0.06
COL9A2-207ENST00000482722 RIMS3Q9UJD0 308 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 PCDHGC3Q9UN70 934 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 ARHGAP26Q9UNA1 814 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 CRADDP78560 199 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 CYTH1Q15438 398 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 TICAM1Q8IUC6 712 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 LILRA2Q8N149 483 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 GFM2Q969S9 779 aaKnown RBP14.65□□□□□ -0.06
COL9A2-207ENST00000482722 MAN1C1Q9NR34 630 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 EMCNQ9ULC0 261 aa14.65□□□□□ -0.06
COL9A2-207ENST00000482722 ZBTB14O43829 449 aa14.64□□□□□ -0.07
COL9A2-207ENST00000482722 APOEP02649 317 aa14.64□□□□□ -0.07
COL9A2-207ENST00000482722 ARRB2P32121 409 aa14.64□□□□□ -0.07
COL9A2-207ENST00000482722 TAZQ16635 292 aa14.64□□□□□ -0.07
COL9A2-207ENST00000482722 ERI1Q8IV48 349 aaKnown RBP14.64□□□□□ -0.07
COL9A2-207ENST00000482722 AGR3Q8TD06 166 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms