RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 NUDT5Q9UKK9 219 aa10.74□□□□□ -0.69
APTX-225ENST00000482687 ZMYND8Q9ULU4 1186 aaPredicted RBP10.74□□□□□ -0.69
APTX-225ENST00000482687 H7C4K7 107 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 TBC1D4O60343 1298 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 CST8O60676 142 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 TJP3O95049 919 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 DNAJB2P25686 324 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 OR1D2P34982 312 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 USP46P62068 366 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 FPGSQ05932 587 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 DUSP4Q13115 394 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 DPYSL3Q14195 570 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 NFE2Q16621 373 aaPredicted RBP10.73□□□□□ -0.69
APTX-225ENST00000482687 CYP1B1Q16678 543 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 MUM1Q2TAK8 710 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 USP41Q3LFD5 358 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 MGAT5BQ3V5L5 792 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 BSPRYQ5W0U4 402 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 NPNTQ6UXI9 565 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 ANKS3Q6ZW76 656 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 JAMLQ86YT9 394 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 SLC39A11Q8N1S5 342 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 FITM2Q8N6M3 262 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 FBXO22Q8NEZ5 403 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 GBP5Q96PP8 586 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 NUDCD1Q96RS6 583 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 HAPLN3Q96S86 360 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 KCTD15Q96SI1 283 aaPredicted RBP10.73□□□□□ -0.69
APTX-225ENST00000482687 DCLRE1BQ9H816 532 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 PCDH18Q9HCL0 1135 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 PIGVQ9NUD9 493 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 COMMD3-BMI1R4GMX3 469 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 GREB1Q4ZG55 1949 aa10.73□□□□□ -0.69
APTX-225ENST00000482687 A0A1W2PQH9 124 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 EFEMP2O95967 443 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 GSTT1P30711 240 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 CA8P35219 290 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 PTDSS1P48651 473 aaKnown RBP10.72□□□□□ -0.69
APTX-225ENST00000482687 ARSEP51690 589 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 PMS2P54278 862 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 YWHAGP61981 247 aaKnown RBP eCLIP10.72□□□□□ -0.69
APTX-225ENST00000482687 PPIGQ13427 754 aaKnown RBP eCLIP10.72□□□□□ -0.69
APTX-225ENST00000482687 KPNB1Q14974 876 aaKnown RBP10.72□□□□□ -0.69
APTX-225ENST00000482687 PM20D1Q6GTS8 502 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 C1orf228Q6PIY5 440 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 ARCQ7LC44 396 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 SCD5Q86SK9 330 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 CMTR2Q8IYT2 770 aaKnown RBP10.72□□□□□ -0.69
APTX-225ENST00000482687 LRRN4Q8WUT4 740 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 TMEM169Q96HH4 297 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 ZBED2Q9BTP6 218 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 MAK16Q9BXY0 300 aaKnown RBP10.72□□□□□ -0.69
APTX-225ENST00000482687 IQCGQ9H095 443 aaKnown RBP10.72□□□□□ -0.69
APTX-225ENST00000482687 LRRC19Q9H756 370 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 NMUR1Q9HB89 426 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 ETNK1Q9HBU6 452 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 LRRC4CQ9HCJ2 640 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 ANLNQ9NQW6 1124 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 GALNT8Q9NY28 637 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 DNPEPQ9ULA0 475 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 STAP1Q9ULZ2 295 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 AP4E1Q9UPM8 1137 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 SNX24Q9Y343 169 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 SNX10Q9Y5X0 201 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 USP3Q9Y6I4 520 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 PLXNA3P51805 1871 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 PLXNA4Q9HCM2 1894 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 WDR27A2RRH5 827 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 FAM187AA6NFU0 413 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 BAIAP3O94812 1187 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 TMCC1O94876 653 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 MAP3K6O95382 1288 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 ECEL1O95672 775 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 IL4RP24394 825 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 L1CAMP32004 1257 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 VPS41P49754 854 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 DRG2P55039 364 aaKnown RBP10.72□□□□□ -0.69
APTX-225ENST00000482687 ROR1Q01973 937 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 GPR17Q13304 367 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 LSAMPQ13449 338 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 DHX34Q14147 1143 aaKnown RBP10.72□□□□□ -0.69
APTX-225ENST00000482687 BOLA3Q53S33 107 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 TMEM240Q5SV17 173 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 STRADAQ7RTN6 431 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 TAC4Q86UU9 113 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 NUP93Q8N1F7 819 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 CCDC33Q8N5R6 958 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 C12orf50Q8NA57 414 aaPredicted RBP10.72□□□□□ -0.69
APTX-225ENST00000482687 NETO2Q8NC67 525 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 FAM13CQ8NE31 585 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 GATA6Q92908 595 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 NR1H4Q96RI1 486 aaPredicted RBP10.72□□□□□ -0.69
APTX-225ENST00000482687 CLSTN3Q9BQT9 956 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 TLE6Q9H808 572 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 ZDHHC18Q9NUE0 388 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 FGFR1OP2Q9NVK5 253 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 NMRK1Q9NWW6 199 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 DDIT4Q9NX09 232 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 OSER1Q9NX31 292 aa10.72□□□□□ -0.69
APTX-225ENST00000482687 SPG21Q9NZD8 308 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms