RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 SERPINA6P08185 405 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 F7P08709 466 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-220ENST00000482507 HOXD8P13378 290 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-220ENST00000482507 MGAT1P26572 445 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 HOXA11P31270 313 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-220ENST00000482507 NR2C2P49116 596 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 SESN2P58004 480 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-220ENST00000482507 PPM1JQ5JR12 505 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 RABGAP1LQ5R372 815 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 ZNF618Q5T7W0 954 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 CASC4Q6P4E1 433 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 MARK2Q7KZI7 788 aaKnown RBP15.29■□□□□ 0.04
ATG4B-220ENST00000482507 ARCQ7LC44 396 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 TP53INP2Q8IXH6 220 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 SLC25A41Q8N5S1 370 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 PHC3Q8NDX5 983 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 EIF2AQ9BY44 585 aaKnown RBP15.29■□□□□ 0.04
ATG4B-220ENST00000482507 FAM124BQ9H5Z6 455 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-220ENST00000482507 DNAJC16Q9Y2G8 782 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 LRCH1Q9Y2L9 728 aa15.29■□□□□ 0.04
ATG4B-220ENST00000482507 A0A0A0MRY4 1105 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 GRK4P32298 578 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 PEX19P40855 299 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 CPT1AP50416 773 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 TMEM62Q0P6H9 643 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 OLIG2Q13516 323 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 PCLAFQ15004 111 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 ZBTB6Q15916 424 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 KYAT1Q16773 422 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 CYS1Q717R9 158 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 FAM131BQ86XD5 332 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 COLGALT1Q8NBJ5 622 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 TFB1MQ8WVM0 346 aaKnown RBP15.28■□□□□ 0.04
ATG4B-220ENST00000482507 KBTBD7Q8WVZ9 684 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 SPATA13Q96N96 652 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 ZNF212Q9UDV6 495 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 E2F8A0AVK6 867 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 PLIN3O60664 434 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 SP100P23497 879 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-220ENST00000482507 KIZQ2M2Z5 673 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 ARHGAP17Q68EM7 881 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 IRGCQ6NXR0 463 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 CES3Q6UWW8 571 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 KYAT3Q6YP21 454 aaKnown RBP15.28■□□□□ 0.04
ATG4B-220ENST00000482507 NET1Q7Z628 596 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-220ENST00000482507 NT5DC4Q86YG4 428 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 MYLK4Q86YV6 388 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-220ENST00000482507 DLGAP2Q9P1A6 1054 aa15.28■□□□□ 0.04
ATG4B-220ENST00000482507 MYO18AQ92614 2054 aaKnown RBP15.27■□□□□ 0.04
ATG4B-220ENST00000482507 A0A088AWK7 358 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 F8W8V4 182 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 SPTLC1O15269 473 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 F2P00734 622 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 ZFXP17010 805 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-220ENST00000482507 SLC1A6P48664 564 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 ACTR3P61158 418 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 PURAQ00577 322 aaKnown RBP15.27■□□□□ 0.04
ATG4B-220ENST00000482507 GRIK4Q16099 956 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 OTUD1Q5VV17 481 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-220ENST00000482507 BSPRYQ5W0U4 402 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 NAIF1Q69YI7 327 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-220ENST00000482507 ZDHHC17Q8IUH5 632 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 ARHGAP24Q8N264 748 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 POU5F2Q8N7G0 328 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 SNX27Q96L92 541 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 SORT1Q99523 831 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 CDHR5Q9HBB8 845 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 PNPOQ9NVS9 261 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 ZNF358Q9NW07 568 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 SYBUQ9NX95 663 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 PPM1HQ9ULR3 514 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 GINS2Q9Y248 185 aa15.27■□□□□ 0.04
ATG4B-220ENST00000482507 USP1O94782 785 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 SMIM10L2AP0DMW4 78 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 SMIM10L2BP0DMW5 78 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 ANPEPP15144 967 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 AOC1P19801 751 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 GJA9P57773 515 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 SLC25A3Q00325 362 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 MFSD10Q14728 455 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 LBRQ14739 615 aaKnown RBP15.27■□□□□ 0.03
ATG4B-220ENST00000482507 MAP3K21Q5TCX8 1036 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 OR52E8Q6IFG1 317 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 LRRC8BQ6P9F7 803 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 C10orf107Q8IVU9 208 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 ANKRD52Q8NB46 1076 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 PIWIL2Q8TC59 973 aaKnown RBP15.27■□□□□ 0.03
ATG4B-220ENST00000482507 PXYLP1Q8TE99 480 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 P2RY11Q96G91 374 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 Q9Y3F1 56 aa15.27■□□□□ 0.03
ATG4B-220ENST00000482507 RNF103O00237 685 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 SORBS2O94875 1100 aaKnown RBP15.26■□□□□ 0.03
ATG4B-220ENST00000482507 ITGA2BP08514 1039 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 PSMB4P28070 264 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 TKTP29401 623 aaKnown RBP15.26■□□□□ 0.03
ATG4B-220ENST00000482507 RPL34P49207 117 aaKnown RBP15.26■□□□□ 0.03
ATG4B-220ENST00000482507 PDE1BQ01064 536 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 BST2Q10589 180 aaKnown RBP15.26■□□□□ 0.03
ATG4B-220ENST00000482507 KCNA10Q16322 511 aa15.26■□□□□ 0.03
ATG4B-220ENST00000482507 PPP1R14CQ8TAE6 165 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms