RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 SFSWAPQ12872 951 aaKnown RBP20.58■□□□□ 0.89
MSH5-215ENST00000482280 CAMK2GQ13555 558 aaPredicted RBP20.58■□□□□ 0.89
MSH5-215ENST00000482280 KRT31Q15323 416 aa20.58■□□□□ 0.89
MSH5-215ENST00000482280 UAP1L1Q3KQV9 507 aa20.58■□□□□ 0.89
MSH5-215ENST00000482280 TTC31Q49AM3 519 aaPredicted RBP20.58■□□□□ 0.89
MSH5-215ENST00000482280 CCDC183Q5T5S1 534 aa20.58■□□□□ 0.89
MSH5-215ENST00000482280 SLC23A3Q6PIS1 610 aa20.58■□□□□ 0.89
MSH5-215ENST00000482280 OLFML1Q6UWY5 402 aa20.58■□□□□ 0.89
MSH5-215ENST00000482280 SLC26A9Q7LBE3 791 aa20.58■□□□□ 0.89
MSH5-215ENST00000482280 KIAA0907Q7Z7F0 614 aaPredicted RBP20.58■□□□□ 0.89
MSH5-215ENST00000482280 C18orf8Q96DM3 657 aa20.58■□□□□ 0.89
MSH5-215ENST00000482280 GPR174Q9BXC1 333 aa20.58■□□□□ 0.89
MSH5-215ENST00000482280 NAT10Q9H0A0 1025 aaKnown RBP20.58■□□□□ 0.89
MSH5-215ENST00000482280 TMEM245Q9H330 911 aa20.58■□□□□ 0.89
MSH5-215ENST00000482280 TMEM74BQ9NUR3 256 aa20.58■□□□□ 0.89
MSH5-215ENST00000482280 USP36Q9P275 1121 aaKnown RBP20.58■□□□□ 0.89
MSH5-215ENST00000482280 DAAM1Q9Y4D1 1078 aa20.58■□□□□ 0.89
MSH5-215ENST00000482280 SDK1Q7Z5N4 2213 aa20.58■□□□□ 0.88
MSH5-215ENST00000482280 DMXL1Q9Y485 3027 aa20.58■□□□□ 0.88
MSH5-215ENST00000482280 CEP250Q9BV73 2442 aa20.57■□□□□ 0.88
MSH5-215ENST00000482280 F8VZ95 297 aa20.57■□□□□ 0.88
MSH5-215ENST00000482280 M0QYT0 321 aa20.57■□□□□ 0.88
MSH5-215ENST00000482280 IGLV3-25P01717 112 aa20.57■□□□□ 0.88
MSH5-215ENST00000482280 SYPP08247 313 aa20.57■□□□□ 0.88
MSH5-215ENST00000482280 CSKP41240 450 aa20.57■□□□□ 0.88
MSH5-215ENST00000482280 PTPN20Q4JDL3 420 aa20.57■□□□□ 0.88
MSH5-215ENST00000482280 FAM102AQ5T9C2 384 aaPredicted RBP20.57■□□□□ 0.88
MSH5-215ENST00000482280 CDKAL1Q5VV42 579 aa20.57■□□□□ 0.88
MSH5-215ENST00000482280 RBM43Q6ZSC3 357 aaKnown RBP20.57■□□□□ 0.88
MSH5-215ENST00000482280 HDDC3Q8N4P3 179 aa20.57■□□□□ 0.88
MSH5-215ENST00000482280 ZNF366Q8N895 744 aa20.57■□□□□ 0.88
MSH5-215ENST00000482280 CADM4Q8NFZ8 388 aa20.57■□□□□ 0.88
MSH5-215ENST00000482280 WFDC5Q8TCV5 224 aa20.57■□□□□ 0.88
MSH5-215ENST00000482280 GANCQ8TET4 914 aa20.57■□□□□ 0.88
MSH5-215ENST00000482280 RPRD1AQ96P16 312 aaPredicted RBP20.57■□□□□ 0.88
MSH5-215ENST00000482280 GTPBP2Q9BX10 602 aaKnown RBP20.57■□□□□ 0.88
MSH5-215ENST00000482280 FAM207AQ9NSI2 230 aaPredicted RBP20.57■□□□□ 0.88
MSH5-215ENST00000482280 FANCLQ9NW38 375 aa20.57■□□□□ 0.88
MSH5-215ENST00000482280 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.57■□□□□ 0.88
MSH5-215ENST00000482280 XPO7Q9UIA9 1087 aaKnown RBP20.57■□□□□ 0.88
MSH5-215ENST00000482280 F9P00740 461 aa20.56■□□□□ 0.88
MSH5-215ENST00000482280 SERPINF2P08697 491 aa20.56■□□□□ 0.88
MSH5-215ENST00000482280 ENGP17813 658 aa20.56■□□□□ 0.88
MSH5-215ENST00000482280 MATKP42679 507 aa20.56■□□□□ 0.88
MSH5-215ENST00000482280 COPAP53621 1224 aa20.56■□□□□ 0.88
MSH5-215ENST00000482280 POLR2FP61218 127 aaKnown RBP20.56■□□□□ 0.88
MSH5-215ENST00000482280 ZBTB16Q05516 673 aa20.56■□□□□ 0.88
MSH5-215ENST00000482280 SLC12A1Q13621 1099 aa20.56■□□□□ 0.88
MSH5-215ENST00000482280 SYCP1Q15431 976 aa20.56■□□□□ 0.88
MSH5-215ENST00000482280 PITRM1Q5JRX3 1037 aa20.56■□□□□ 0.88
MSH5-215ENST00000482280 ZNF776Q68DI1 518 aaPredicted RBP20.56■□□□□ 0.88
MSH5-215ENST00000482280 FAM124AQ86V42 546 aa20.56■□□□□ 0.88
MSH5-215ENST00000482280 ZNF677Q86XU0 584 aa20.56■□□□□ 0.88
MSH5-215ENST00000482280 ZNF397Q8NF99 534 aaPredicted RBP20.56■□□□□ 0.88
MSH5-215ENST00000482280 TTC17Q96AE7 1141 aa20.56■□□□□ 0.88
MSH5-215ENST00000482280 ZNF419Q96HQ0 510 aaPredicted RBP20.56■□□□□ 0.88
MSH5-215ENST00000482280 WDCPQ9H6R7 721 aa20.56■□□□□ 0.88
MSH5-215ENST00000482280 WSB2Q9NYS7 404 aaPredicted RBP20.56■□□□□ 0.88
MSH5-215ENST00000482280 NCKAP1Q9Y2A7 1128 aa20.56■□□□□ 0.88
MSH5-215ENST00000482280 MYO18AQ92614 2054 aaKnown RBP20.56■□□□□ 0.88
MSH5-215ENST00000482280 A0A1B0GVM2 712 aa20.55■□□□□ 0.88
MSH5-215ENST00000482280 TCAF2A6NFQ2 919 aa20.55■□□□□ 0.88
MSH5-215ENST00000482280 GFPT2O94808 682 aa20.55■□□□□ 0.88
MSH5-215ENST00000482280 SRPRAP08240 638 aaKnown RBP20.55■□□□□ 0.88
MSH5-215ENST00000482280 SULT1E1P49888 294 aa20.55■□□□□ 0.88
MSH5-215ENST00000482280 PITX1P78337 314 aaPredicted RBP20.55■□□□□ 0.88
MSH5-215ENST00000482280 ECT2LQ008S8 904 aa20.55■□□□□ 0.88
MSH5-215ENST00000482280 PTPRNQ16849 979 aa20.55■□□□□ 0.88
MSH5-215ENST00000482280 PLEKHG6Q3KR16 790 aa20.55■□□□□ 0.88
MSH5-215ENST00000482280 PEAR1Q5VY43 1037 aaPredicted RBP20.55■□□□□ 0.88
MSH5-215ENST00000482280 SLC41A1Q8IVJ1 513 aa20.55■□□□□ 0.88
MSH5-215ENST00000482280 NEK11Q8NG66 645 aa20.55■□□□□ 0.88
MSH5-215ENST00000482280 NAA15Q9BXJ9 866 aaKnown RBP20.55■□□□□ 0.88
MSH5-215ENST00000482280 MIR1-1HGQ9H1L0 117 aa20.55■□□□□ 0.88
MSH5-215ENST00000482280 CD93Q9NPY3 652 aa20.55■□□□□ 0.88
MSH5-215ENST00000482280 ABCA7Q8IZY2 2146 aa20.54■□□□□ 0.88
MSH5-215ENST00000482280 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.54■□□□□ 0.88
MSH5-215ENST00000482280 CDH5P33151 784 aaPredicted RBP20.54■□□□□ 0.88
MSH5-215ENST00000482280 SCNN1AP37088 669 aa20.54■□□□□ 0.88
MSH5-215ENST00000482280 STAT1P42224 750 aa20.54■□□□□ 0.88
MSH5-215ENST00000482280 NOVA1P51513 510 aaKnown RBP20.54■□□□□ 0.88
MSH5-215ENST00000482280 DEUP1Q05D60 604 aa20.54■□□□□ 0.88
MSH5-215ENST00000482280 SULT2A1Q06520 285 aa20.54■□□□□ 0.88
MSH5-215ENST00000482280 ZNF177Q13360 481 aaPredicted RBP20.54■□□□□ 0.88
MSH5-215ENST00000482280 NOP9Q86U38 636 aaKnown RBP20.54■□□□□ 0.88
MSH5-215ENST00000482280 CCAR2Q8N163 923 aaKnown RBP20.54■□□□□ 0.88
MSH5-215ENST00000482280 KDM1BQ8NB78 822 aa20.54■□□□□ 0.88
MSH5-215ENST00000482280 SNX19Q92543 992 aa20.54■□□□□ 0.88
MSH5-215ENST00000482280 SIK2Q9H0K1 926 aa20.54■□□□□ 0.88
MSH5-215ENST00000482280 PCED1AQ9H1Q7 454 aa20.54■□□□□ 0.88
MSH5-215ENST00000482280 SLC32A1Q9H598 525 aa20.54■□□□□ 0.88
MSH5-215ENST00000482280 NLRC4Q9NPP4 1024 aa20.54■□□□□ 0.88
MSH5-215ENST00000482280 PRSS16Q9NQE7 514 aa20.54■□□□□ 0.88
MSH5-215ENST00000482280 SCML1Q9UN30 329 aa20.54■□□□□ 0.88
MSH5-215ENST00000482280 ERVW-1Q9UQF0 538 aa20.54■□□□□ 0.88
MSH5-215ENST00000482280 PLXND1Q9Y4D7 1925 aa20.53■□□□□ 0.88
MSH5-215ENST00000482280 GOLGA8SH3BPF8 625 aa20.53■□□□□ 0.88
MSH5-215ENST00000482280 ADRB1P08588 477 aa20.53■□□□□ 0.88
MSH5-215ENST00000482280 SOX5P35711 763 aa20.53■□□□□ 0.88
MSH5-215ENST00000482280 COPB1P53618 953 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms