RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 GPR156Q8NFN8 814 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 GABPB2Q8TAK5 448 aaPredicted RBP3.54□□□□□ -1.84
SMC6-208ENST00000481708 ZNF333Q96JL9 665 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 KCNH6Q9H252 994 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 FBXO34Q9NWN3 711 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 ATP11BQ9Y2G3 1177 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 NEU2Q9Y3R4 380 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 ASB1Q9Y576 335 aa3.54□□□□□ -1.84
SMC6-208ENST00000481708 TCRBV5S2A0A599 114 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 VEGFDO43915 354 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 KERAO60938 352 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 PDE8BO95263 885 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 ESR1P03372 595 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 CD1AP06126 327 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 TPM2P07951 284 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 CPT2P23786 658 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 AVPR2P30518 371 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 AKT1P31749 480 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 CYP27A1Q02318 531 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 CHAF1BQ13112 559 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 MAMLD1Q13495 774 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 LRIT3Q3SXY7 679 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 GPR139Q6DWJ6 353 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 OR6J1Q8NGC5 347 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 CEP76Q8TAP6 659 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 PDLIM5Q96HC4 596 aaKnown RBP3.53□□□□□ -1.84
SMC6-208ENST00000481708 NLRP4Q96MN2 994 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 MOGAT1Q96PD6 335 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 ATP6V0BQ99437 205 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 MYOTQ9UBF9 498 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 CHORDC1Q9UHD1 332 aaPredicted RBP3.53□□□□□ -1.84
SMC6-208ENST00000481708 RUVBL1Q9Y265 456 aaKnown RBP3.53□□□□□ -1.84
SMC6-208ENST00000481708 ACTL7AQ9Y615 435 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 MAP3K15Q6ZN16 1313 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 NID2Q14112 1375 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 MYO16Q9Y6X6 1858 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 PRR19A6NJB7 356 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 INO80B-WBP1J3KQ70 363 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 J3KTA2 159 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 SYNCRIPO60506 623 aaKnown RBP3.53□□□□□ -1.84
SMC6-208ENST00000481708 LY86O95711 162 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 SUPT20HL2P0C7V6 817 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 STMN1P16949 149 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 ALDH1A3P47895 512 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 AARSP49588 968 aaKnown RBP eCLIP3.53□□□□□ -1.84
SMC6-208ENST00000481708 POLGP54098 1239 aaPredicted RBP3.53□□□□□ -1.84
SMC6-208ENST00000481708 EIF4A1P60842 406 aaKnown RBP3.53□□□□□ -1.84
SMC6-208ENST00000481708 NAA25Q14CX7 972 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 SUPT20HL1Q3ZLR7 823 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 ANKDD1AQ495B1 522 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 SLC39A12Q504Y0 691 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 THEMIS2Q5TEJ8 643 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 ATF7IPQ6VMQ6 1270 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 THNSL1Q8IYQ7 743 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 MPP5Q8N3R9 675 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 TTLL6Q8N841 843 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 HIPK4Q8NE63 616 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 PIK3C3Q8NEB9 887 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 TOE1Q96GM8 510 aaKnown RBP3.53□□□□□ -1.84
SMC6-208ENST00000481708 SERHLQ9NQF3 203 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 HCFC1R1Q9NWW0 138 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 ZC3H7BQ9UGR2 993 aaKnown RBP3.53□□□□□ -1.84
SMC6-208ENST00000481708 DUSP13Q9UII6 198 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 A0A0B4J203 849 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 TMEM110-MUSTN1A8MSY1 372 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 BCAS2O75934 225 aaPredicted RBP3.53□□□□□ -1.84
SMC6-208ENST00000481708 UNC5CO95185 931 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 DESP17661 470 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 PRMT2P55345 433 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 MPP3Q13368 585 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 PHF19Q5T6S3 580 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 KANK2Q63ZY3 851 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 FIP1L1Q6UN15 594 aaKnown RBP3.53□□□□□ -1.84
SMC6-208ENST00000481708 DSG4Q86SJ6 1040 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 ZDHHC13Q8IUH4 622 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 NLGN4XQ8N0W4 816 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 SPC24Q8NBT2 197 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 BRIX1Q8TDN6 353 aaKnown RBP3.53□□□□□ -1.84
SMC6-208ENST00000481708 EXOC4Q96A65 974 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 SRSF8Q9BRL6 282 aaKnown RBP3.53□□□□□ -1.84
SMC6-208ENST00000481708 NOL10Q9BSC4 688 aaKnown RBP3.53□□□□□ -1.84
SMC6-208ENST00000481708 TRIM7Q9C029 511 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 SLAMF7Q9NQ25 335 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 ADARB2Q9NS39 739 aaKnown RBP3.53□□□□□ -1.84
SMC6-208ENST00000481708 CAPN11Q9UMQ6 739 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 TMEM5Q9Y2B1 443 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 PCDHA5Q9Y5H7 936 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 HCFC2Q9Y5Z7 792 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 MICAL3Q7RTP6 2002 aa3.53□□□□□ -1.84
SMC6-208ENST00000481708 CCDC78A2IDD5 438 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 H0Y858 1186 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 M0QZQ0 153 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 DYRK3O43781 588 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 QDPRP09417 244 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 PNLIPP16233 465 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 DDCP20711 480 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 HOXA11P31270 313 aaPredicted RBP3.52□□□□□ -1.85
SMC6-208ENST00000481708 CD96P40200 585 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 PSMB10P40306 273 aa3.52□□□□□ -1.85
SMC6-208ENST00000481708 PEX19P40855 299 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms