RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 KLHL13Q9P2N7 655 aa4.22□□□□□ -1.73
COPA-204ENST00000481522 TAGLN3Q9UI15 199 aa4.22□□□□□ -1.73
COPA-204ENST00000481522 COMMD10Q9Y6G5 202 aa4.22□□□□□ -1.73
COPA-204ENST00000481522 SAMD9LQ8IVG5 1584 aa4.22□□□□□ -1.73
COPA-204ENST00000481522 WDR17Q8IZU2 1322 aa4.21□□□□□ -1.73
COPA-204ENST00000481522 CNTNAP2Q9UHC6 1331 aa4.21□□□□□ -1.73
COPA-204ENST00000481522 ABCC3O15438 1527 aa4.21□□□□□ -1.73
COPA-204ENST00000481522 ITPR3Q14573 2671 aa4.21□□□□□ -1.73
COPA-204ENST00000481522 COL22A1Q8NFW1 1626 aaPredicted RBP4.21□□□□□ -1.73
COPA-204ENST00000481522 A0A087WV62 115 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 GOLGA6L3A6NEY3 463 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 F5H423 210 aaPredicted RBP4.21□□□□□ -1.74
COPA-204ENST00000481522 CA12O43570 354 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 CBFA2T3O75081 653 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 PEX14O75381 377 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 CBSLP0DN79 551 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 DRD1P21728 446 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 CBSP35520 551 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 IL6STP40189 918 aaPredicted RBP4.21□□□□□ -1.74
COPA-204ENST00000481522 DEUP1Q05D60 604 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 CCDC15Q0P6D6 951 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 MTAPQ13126 283 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 FHL3Q13643 280 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 P3H1Q32P28 736 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 SUPT20HL1Q3ZLR7 823 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 GRHL2Q6ISB3 625 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 ZNF813Q6ZN06 617 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 C12orf76Q8N812 135 aaPredicted RBP4.21□□□□□ -1.74
COPA-204ENST00000481522 OSR1Q8TAX0 266 aaPredicted RBP4.21□□□□□ -1.74
COPA-204ENST00000481522 CUL5Q93034 780 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 HIC2Q96JB3 615 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 EIF3CQ99613 913 aaKnown RBP4.21□□□□□ -1.74
COPA-204ENST00000481522 CRB3Q9BUF7 120 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 QTRT1Q9BXR0 403 aaKnown RBP4.21□□□□□ -1.74
COPA-204ENST00000481522 TMEM8AQ9HCN3 771 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 ASAP1Q9ULH1 1129 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 DTNAQ9Y4J8 743 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 CACNA1IQ9P0X4 2223 aa4.21□□□□□ -1.74
COPA-204ENST00000481522 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.2□□□□□ -1.74
COPA-204ENST00000481522 SMIM35A0A1B0GVV1 85 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 KCNU1A8MYU2 1149 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 TRIM38O00635 465 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 PIP5K1BO14986 540 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 SKAP2O75563 359 aaPredicted RBP4.2□□□□□ -1.74
COPA-204ENST00000481522 PBX1P40424 430 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 MMP13P45452 471 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 GSTM5P46439 218 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 GPC5P78333 572 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 ICA1Q05084 483 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 CHAF1AQ13111 956 aaPredicted RBP4.2□□□□□ -1.74
COPA-204ENST00000481522 KCNJ12Q14500 433 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 AASDHQ4L235 1098 aaPredicted RBP4.2□□□□□ -1.74
COPA-204ENST00000481522 AWAT1Q58HT5 328 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 TMEM196Q5HYL7 178 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 SLC2A7Q6PXP3 512 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 GATAD2AQ86YP4 633 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 ENAHQ8N8S7 591 aaPredicted RBP4.2□□□□□ -1.74
COPA-204ENST00000481522 PRSS3P2Q8NHM4 247 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 POF1BQ8WVV4 589 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 OVCA2Q8WZ82 227 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 RPL36ALQ969Q0 106 aaKnown RBP4.2□□□□□ -1.74
COPA-204ENST00000481522 LRRC59Q96AG4 307 aaKnown RBP4.2□□□□□ -1.74
COPA-204ENST00000481522 EDC3Q96F86 508 aaKnown RBP4.2□□□□□ -1.74
COPA-204ENST00000481522 PRSS22Q9GZN4 317 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 REV3LO60673 3130 aa4.2□□□□□ -1.74
COPA-204ENST00000481522 FBN3Q75N90 2809 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 PNMA6EA0A0J9YXQ4 647 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 H3BNC9 293 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 J3KTA2 159 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 CLIC1O00299 241 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 PCDH17O14917 1159 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 FYB1O15117 783 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 BMP15O95972 392 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 LDHAP00338 332 aaKnown RBP4.19□□□□□ -1.74
COPA-204ENST00000481522 SLC3A2P08195 630 aaKnown RBP4.19□□□□□ -1.74
COPA-204ENST00000481522 TMIGD3P0DMS9 266 aaPredicted RBP4.19□□□□□ -1.74
COPA-204ENST00000481522 NPPBP16860 134 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 PLCD1P51178 756 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 JAK3P52333 1124 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 ALDH18A1P54886 795 aaKnown RBP4.19□□□□□ -1.74
COPA-204ENST00000481522 SEMA3BQ13214 749 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 BFSP2Q13515 415 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 DNASE1L3Q13609 305 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 CSHL1Q14406 222 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 SPARCL1Q14515 664 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 PUM3Q15397 648 aaKnown RBP4.19□□□□□ -1.74
COPA-204ENST00000481522 TRIM71Q2Q1W2 868 aaKnown RBP4.19□□□□□ -1.74
COPA-204ENST00000481522 ANO7Q6IWH7 933 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 GGT6Q6P531 493 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 RANBP10Q6VN20 620 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 Q7L0L9 218 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 CLASRPQ8N2M8 674 aaKnown RBP4.19□□□□□ -1.74
COPA-204ENST00000481522 DENND1AQ8TEH3 1009 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 PNISRQ8TF01 805 aaKnown RBP4.19□□□□□ -1.74
COPA-204ENST00000481522 PRPF18Q99633 342 aaKnown RBP4.19□□□□□ -1.74
COPA-204ENST00000481522 HNRNPABQ99729 332 aaKnown RBP4.19□□□□□ -1.74
COPA-204ENST00000481522 EPS8L2Q9H6S3 715 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 RXFP3Q9NSD7 469 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 ARL8BQ9NVJ2 186 aa4.19□□□□□ -1.74
COPA-204ENST00000481522 GAR1Q9NY12 217 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms