RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 FRMD4BQ9Y2L6 1034 aa18.04■□□□□ 0.48
RXRB-203ENST00000481441 TLR4O00206 839 aa18.03■□□□□ 0.48
RXRB-203ENST00000481441 TULP2O00295 520 aa18.03■□□□□ 0.48
RXRB-203ENST00000481441 MAPK13O15264 365 aa18.03■□□□□ 0.48
RXRB-203ENST00000481441 RNASEH1O60930 286 aaKnown RBP18.03■□□□□ 0.48
RXRB-203ENST00000481441 RNASEH2AO75792 299 aaKnown RBP18.03■□□□□ 0.48
RXRB-203ENST00000481441 TRIM49P0CI25 452 aa18.03■□□□□ 0.48
RXRB-203ENST00000481441 TRIM49CP0CI26 452 aa18.03■□□□□ 0.48
RXRB-203ENST00000481441 RAD23BP54727 409 aa18.03■□□□□ 0.48
RXRB-203ENST00000481441 ARID5BQ14865 1188 aa18.03■□□□□ 0.48
RXRB-203ENST00000481441 PIK3R6Q5UE93 754 aa18.03■□□□□ 0.48
RXRB-203ENST00000481441 RFWD3Q6PCD5 774 aa18.03■□□□□ 0.48
RXRB-203ENST00000481441 DHX40Q8IX18 779 aaKnown RBP18.03■□□□□ 0.48
RXRB-203ENST00000481441 EDEM1Q92611 657 aa18.03■□□□□ 0.48
RXRB-203ENST00000481441 WBP1Q96G27 269 aa18.03■□□□□ 0.48
RXRB-203ENST00000481441 SERAC1Q96JX3 654 aa18.03■□□□□ 0.48
RXRB-203ENST00000481441 MRGPRX3Q96LB0 322 aa18.03■□□□□ 0.48
RXRB-203ENST00000481441 IRX2Q9BZI1 471 aaPredicted RBP18.03■□□□□ 0.48
RXRB-203ENST00000481441 INTS6Q9UL03 887 aaKnown RBP18.03■□□□□ 0.48
RXRB-203ENST00000481441 MSI1O43347 362 aaKnown RBP18.02■□□□□ 0.48
RXRB-203ENST00000481441 TBL1XO60907 577 aa18.02■□□□□ 0.48
RXRB-203ENST00000481441 YEATS4O95619 227 aa18.02■□□□□ 0.48
RXRB-203ENST00000481441 ACP1P24666 158 aa18.02■□□□□ 0.48
RXRB-203ENST00000481441 SLC8A1P32418 973 aa18.02■□□□□ 0.48
RXRB-203ENST00000481441 ST8SIA6P61647 398 aa18.02■□□□□ 0.48
RXRB-203ENST00000481441 KCNH2Q12809 1159 aa18.02■□□□□ 0.48
RXRB-203ENST00000481441 C9orf64Q5T6V5 341 aa18.02■□□□□ 0.48
RXRB-203ENST00000481441 BSPRYQ5W0U4 402 aa18.02■□□□□ 0.48
RXRB-203ENST00000481441 SPATS2Q86XZ4 545 aaKnown RBP18.02■□□□□ 0.48
RXRB-203ENST00000481441 MMAAQ8IVH4 418 aaKnown RBP18.02■□□□□ 0.48
RXRB-203ENST00000481441 RNF139Q8WU17 664 aa18.02■□□□□ 0.48
RXRB-203ENST00000481441 OMDQ99983 421 aa18.02■□□□□ 0.48
RXRB-203ENST00000481441 CISHQ9NSE2 258 aa18.02■□□□□ 0.48
RXRB-203ENST00000481441 ATMQ13315 3056 aa18.02■□□□□ 0.48
RXRB-203ENST00000481441 DOCK9Q9BZ29 2069 aa18.02■□□□□ 0.48
RXRB-203ENST00000481441 GOLGA6L7A0A1B0GV03 622 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 YJEFN3A6XGL0 299 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 E7ENQ6 273 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 LATO43561 262 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 ASLP04424 464 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 PDIA4P13667 645 aaKnown RBP18.01■□□□□ 0.47
RXRB-203ENST00000481441 SLC6A4P31645 630 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 CSKP41240 450 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 SLC8A3P57103 927 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 PROX2Q3B8N5 592 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 TAF1BQ53T94 588 aaPredicted RBP18.01■□□□□ 0.47
RXRB-203ENST00000481441 SLC45A4Q5BKX6 768 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 FAM133BQ5BKY9 247 aaKnown RBP18.01■□□□□ 0.47
RXRB-203ENST00000481441 MFN1Q8IWA4 741 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 OXR1Q8N573 874 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 TTC39CQ8N584 583 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 AADATQ8N5Z0 425 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 ZNF557Q8N988 423 aaPredicted RBP18.01■□□□□ 0.47
RXRB-203ENST00000481441 KDM1BQ8NB78 822 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 CCDC150Q8NCX0 1101 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 FIBINQ8TAL6 211 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 FAXDC2Q96IV6 333 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 ZNF396Q96N95 335 aaPredicted RBP18.01■□□□□ 0.47
RXRB-203ENST00000481441 IPO9Q96P70 1041 aaKnown RBP18.01■□□□□ 0.47
RXRB-203ENST00000481441 FAM129BQ96TA1 746 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 LGMNQ99538 433 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 EXOC1Q9NV70 894 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 TPX2Q9ULW0 747 aaKnown RBP18.01■□□□□ 0.47
RXRB-203ENST00000481441 TRAF3IP3Q9Y228 551 aa18.01■□□□□ 0.47
RXRB-203ENST00000481441 TARSL2A2RTX5 802 aaKnown RBP18■□□□□ 0.47
RXRB-203ENST00000481441 XPO1O14980 1071 aaKnown RBP18■□□□□ 0.47
RXRB-203ENST00000481441 IRAK2O43187 625 aa18■□□□□ 0.47
RXRB-203ENST00000481441 IGLV3-27P01718 113 aa18■□□□□ 0.47
RXRB-203ENST00000481441 ADPRHP54922 357 aa18■□□□□ 0.47
RXRB-203ENST00000481441 RHDQ02161 417 aa18■□□□□ 0.47
RXRB-203ENST00000481441 KMT5BQ4FZB7 885 aa18■□□□□ 0.47
RXRB-203ENST00000481441 NAPEPLDQ6IQ20 393 aa18■□□□□ 0.47
RXRB-203ENST00000481441 INTS8Q75QN2 995 aaKnown RBP18■□□□□ 0.47
RXRB-203ENST00000481441 MFSD2AQ8NA29 543 aa18■□□□□ 0.47
RXRB-203ENST00000481441 ZNF248Q8NDW4 579 aa18■□□□□ 0.47
RXRB-203ENST00000481441 SEMA4DQ92854 862 aa18■□□□□ 0.47
RXRB-203ENST00000481441 HIC2Q96JB3 615 aa18■□□□□ 0.47
RXRB-203ENST00000481441 MMRN2Q9H8L6 949 aa18■□□□□ 0.47
RXRB-203ENST00000481441 LRRC4Q9HBW1 653 aa18■□□□□ 0.47
RXRB-203ENST00000481441 ABCC13Q9NSE7 274 aa18■□□□□ 0.47
RXRB-203ENST00000481441 TTC34A8MYJ7 566 aa17.99■□□□□ 0.47
RXRB-203ENST00000481441 MT-CO3P00414 261 aa17.99■□□□□ 0.47
RXRB-203ENST00000481441 GOT1P17174 413 aa17.99■□□□□ 0.47
RXRB-203ENST00000481441 PPP2CBP62714 309 aa17.99■□□□□ 0.47
RXRB-203ENST00000481441 PPP2CAP67775 309 aa17.99■□□□□ 0.47
RXRB-203ENST00000481441 E2F1Q01094 437 aa17.99■□□□□ 0.47
RXRB-203ENST00000481441 ENPEPQ07075 957 aa17.99■□□□□ 0.47
RXRB-203ENST00000481441 ADIGQ0VDE8 80 aa17.99■□□□□ 0.47
RXRB-203ENST00000481441 GOLGA7BQ2TAP0 167 aa17.99■□□□□ 0.47
RXRB-203ENST00000481441 PKDCCQ504Y2 493 aa17.99■□□□□ 0.47
RXRB-203ENST00000481441 MSANTD2Q6P1R3 559 aa17.99■□□□□ 0.47
RXRB-203ENST00000481441 KDM7AQ6ZMT4 941 aa17.99■□□□□ 0.47
RXRB-203ENST00000481441 SND1Q7KZF4 910 aaKnown RBP eCLIP17.99■□□□□ 0.47
RXRB-203ENST00000481441 OR14C36Q8NHC7 312 aa17.99■□□□□ 0.47
RXRB-203ENST00000481441 TATDN2Q93075 761 aa17.99■□□□□ 0.47
RXRB-203ENST00000481441 INTS4Q96HW7 963 aaKnown RBP17.99■□□□□ 0.47
RXRB-203ENST00000481441 PRICKLE1Q96MT3 831 aaPredicted RBP17.99■□□□□ 0.47
RXRB-203ENST00000481441 ZNF578Q96N58 590 aaPredicted RBP17.99■□□□□ 0.47
RXRB-203ENST00000481441 SEMA4CQ9C0C4 833 aa17.99■□□□□ 0.47
RXRB-203ENST00000481441 TMEM8AQ9HCN3 771 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms