RNA–Protein interactions for RNA: ENST00000481121.5

NELFE-208, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-208ENST00000481121 BNIPLQ7Z465 357 aa21.5■■□□□ 1.03
NELFE-208ENST00000481121 KIAA0907Q7Z7F0 614 aaPredicted RBP21.5■■□□□ 1.03
NELFE-208ENST00000481121 CPLX3Q8WVH0 158 aa21.5■■□□□ 1.03
NELFE-208ENST00000481121 HMGB4Q8WW32 186 aa21.5■■□□□ 1.03
NELFE-208ENST00000481121 SORCS1Q8WY21 1168 aa21.5■■□□□ 1.03
NELFE-208ENST00000481121 RPRD1AQ96P16 312 aaPredicted RBP21.5■■□□□ 1.03
NELFE-208ENST00000481121 HINFPQ9BQA5 517 aa21.5■■□□□ 1.03
NELFE-208ENST00000481121 TAS2R14Q9NYV8 317 aa21.5■■□□□ 1.03
NELFE-208ENST00000481121 CAPN11Q9UMQ6 739 aa21.5■■□□□ 1.03
NELFE-208ENST00000481121 A0A1B0GVM2 712 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 TCAF2A6NFQ2 919 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 C2CD4BA6NLJ0 364 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 GYPCP04921 128 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 IL12RB1P42701 662 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 ZBED6P86452 979 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 LMAN2Q12907 356 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 AUHQ13825 339 aaKnown RBP21.49■■□□□ 1.03
NELFE-208ENST00000481121 ZNF234Q14588 700 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 STARD3Q14849 445 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 LPAL2Q16609 132 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 FBXL22Q6P050 247 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 ADIPOR2Q86V24 386 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 CIR1Q86X95 450 aaPredicted RBP21.49■■□□□ 1.03
NELFE-208ENST00000481121 FAM131BQ86XD5 332 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 MCOLN2Q8IZK6 566 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 SIK2Q9H0K1 926 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 NCDNQ9UBB6 729 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 RAD54BQ9Y620 910 aa21.49■■□□□ 1.03
NELFE-208ENST00000481121 A0A1W2PQF6 199 aa21.48■■□□□ 1.03
NELFE-208ENST00000481121 ANKRD62A6NC57 917 aa21.48■■□□□ 1.03
NELFE-208ENST00000481121 WASH3PC4AMC7 463 aa21.48■■□□□ 1.03
NELFE-208ENST00000481121 SKILP12757 684 aa21.48■■□□□ 1.03
NELFE-208ENST00000481121 POLR2EP19388 210 aaKnown RBP21.48■■□□□ 1.03
NELFE-208ENST00000481121 RFC1P35251 1148 aaPredicted RBP21.48■■□□□ 1.03
NELFE-208ENST00000481121 PTPN9P43378 593 aa21.48■■□□□ 1.03
NELFE-208ENST00000481121 C15orf59Q2T9L4 293 aaPredicted RBP21.48■■□□□ 1.03
NELFE-208ENST00000481121 FUT11Q495W5 492 aa21.48■■□□□ 1.03
NELFE-208ENST00000481121 CCDC14Q49A88 953 aa21.48■■□□□ 1.03
NELFE-208ENST00000481121 MBLAC2Q68D91 279 aa21.48■■□□□ 1.03
NELFE-208ENST00000481121 SERPINA13PQ6UXR4 307 aa21.48■■□□□ 1.03
NELFE-208ENST00000481121 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.48■■□□□ 1.03
NELFE-208ENST00000481121 CCAR2Q8N163 923 aaKnown RBP21.48■■□□□ 1.03
NELFE-208ENST00000481121 PGBD3Q8N328 593 aa21.48■■□□□ 1.03
NELFE-208ENST00000481121 SYN2Q92777 582 aaPredicted RBP21.48■■□□□ 1.03
NELFE-208ENST00000481121 ANLNQ9NQW6 1124 aa21.48■■□□□ 1.03
NELFE-208ENST00000481121 LUC7L2Q9Y383 392 aaKnown RBP21.48■■□□□ 1.03
NELFE-208ENST00000481121 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.48■■□□□ 1.032e-7■■■■□ 25.7
NELFE-208ENST00000481121 EP300Q09472 2414 aaPredicted RBP21.48■■□□□ 1.03
NELFE-208ENST00000481121 GVINP1Q7Z2Y8 2422 aa21.48■■□□□ 1.03
NELFE-208ENST00000481121 GPR179Q6PRD1 2367 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 SIGLEC16A6NMB1 481 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 I6L893 689 aaPredicted RBP21.47■■□□□ 1.03
NELFE-208ENST00000481121 ZBTB24O43167 697 aaPredicted RBP21.47■■□□□ 1.03
NELFE-208ENST00000481121 ENDOD1O94919 500 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 ATP5BP06576 529 aaKnown RBP21.47■■□□□ 1.03
NELFE-208ENST00000481121 GPD1P21695 349 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 RRM1P23921 792 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 ENPP2Q13822 863 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 USP39Q53GS9 565 aaKnown RBP21.47■■□□□ 1.03
NELFE-208ENST00000481121 FSCBQ5H9T9 825 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 KIAA1211LQ6NV74 962 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 STRADAQ7RTN6 431 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 CYB5D2Q8WUJ1 264 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 RUBCNQ92622 972 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 IGSF8Q969P0 613 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 ERLEC1Q96DZ1 483 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 VCPIP1Q96JH7 1222 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 MCEEQ96PE7 176 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 KIAA1522Q9P206 1035 aaPredicted RBP21.47■■□□□ 1.03
NELFE-208ENST00000481121 PLA2G4CQ9UP65 541 aa21.47■■□□□ 1.03
NELFE-208ENST00000481121 TCRBV5S1A1TA0A578 114 aa21.46■■□□□ 1.03
NELFE-208ENST00000481121 DDX3XO00571 662 aaKnown RBP eCLIP21.46■■□□□ 1.034e-20■■■■■ 76.5
NELFE-208ENST00000481121 MOCS3O95396 460 aa21.46■■□□□ 1.03
NELFE-208ENST00000481121 GABRG2P18507 467 aa21.46■■□□□ 1.03
NELFE-208ENST00000481121 FNDC3BQ53EP0 1204 aaKnown RBP21.46■■□□□ 1.03
NELFE-208ENST00000481121 ACBD5Q5T8D3 534 aaPredicted RBP21.46■■□□□ 1.03
NELFE-208ENST00000481121 LAIR1Q6GTX8 287 aa21.46■■□□□ 1.03
NELFE-208ENST00000481121 NUP205Q92621 2012 aa21.46■■□□□ 1.03
NELFE-208ENST00000481121 LMLNQ96KR4 655 aa21.46■■□□□ 1.03
NELFE-208ENST00000481121 CD248Q9HCU0 757 aa21.46■■□□□ 1.03
NELFE-208ENST00000481121 TMPRSS4Q9NRS4 437 aa21.46■■□□□ 1.03
NELFE-208ENST00000481121 GMEB2Q9UKD1 530 aa21.46■■□□□ 1.03
NELFE-208ENST00000481121 BZW2Q9Y6E2 419 aaKnown RBP21.46■■□□□ 1.03
NELFE-208ENST00000481121 TNRC6BQ9UPQ9 1833 aaKnown RBP21.45■■□□□ 1.02
NELFE-208ENST00000481121 SERPING1P05155 500 aa21.45■■□□□ 1.02
NELFE-208ENST00000481121 DLDP09622 509 aaKnown RBP21.45■■□□□ 1.02
NELFE-208ENST00000481121 GZMAP12544 262 aa21.45■■□□□ 1.02
NELFE-208ENST00000481121 PRKCHP24723 683 aa21.45■■□□□ 1.02
NELFE-208ENST00000481121 CASP14P31944 242 aa21.45■■□□□ 1.02
NELFE-208ENST00000481121 IRAK1P51617 712 aa21.45■■□□□ 1.02
NELFE-208ENST00000481121 ARL13BQ3SXY8 428 aa21.45■■□□□ 1.02
NELFE-208ENST00000481121 PITRM1Q5JRX3 1037 aa21.45■■□□□ 1.02
NELFE-208ENST00000481121 SH3PXD2AQ5TCZ1 1133 aa21.45■■□□□ 1.02
NELFE-208ENST00000481121 HGSNATQ68CP4 663 aa21.45■■□□□ 1.02
NELFE-208ENST00000481121 SPECC1LQ69YQ0 1117 aa21.45■■□□□ 1.02
NELFE-208ENST00000481121 DCUN1D2Q6PH85 259 aa21.45■■□□□ 1.02
NELFE-208ENST00000481121 WDR59Q6PJI9 974 aa21.45■■□□□ 1.02
NELFE-208ENST00000481121 C14orf80Q86SX3 495 aa21.45■■□□□ 1.02
NELFE-208ENST00000481121 VPS36Q86VN1 386 aa21.45■■□□□ 1.02
NELFE-208ENST00000481121 FAM172AQ8WUF8 416 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms