RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 ILDR1Q86SU0 546 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 TXNRD3Q86VQ6 643 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 DNAJB8Q8NHS0 232 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 ATL1Q8WXF7 558 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 LENG1Q96BZ8 264 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 GPR63Q9BZJ6 419 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 VPS51Q9UID3 782 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 CORO2BQ9UQ03 480 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 E9PBE3 544 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 IFRD1O00458 451 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 NKRFO15226 690 aaKnown RBP eCLIP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 SLC37A4O43826 429 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 BAIAP3O94812 1187 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 MLYCDO95822 493 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 MOCS2O96007 188 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 JCHAINP01591 159 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 GPIP06744 558 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 ANPEPP15144 967 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 TRIP4Q15650 581 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 CYP51A1Q16850 503 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 ZNF772Q68DY9 489 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 CDC42EP5Q6NZY7 148 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 TMEM126BQ8IUX1 230 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 FBXO39Q8N4B4 442 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 AGR3Q8TD06 166 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 PTCD2Q8WV60 388 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 REPS1Q96D71 796 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 TEKT5Q96M29 485 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 TMEM121Q9BTD3 319 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 ACTR8Q9H981 624 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 KLHL11Q9NVR0 708 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 HMGXB4Q9UGU5 601 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 MAGEL2Q9UJ55 1249 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 FGF10O15520 208 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 DCXO43602 365 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 GUCY1B2O75343 617 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 TRMUO75648 421 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 ATG7O95352 703 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 SLC4A1P02730 911 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 SNRPB2P08579 225 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 FGRP09769 529 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 VAC14Q08AM6 782 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 PCID2Q5JVF3 399 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 TMEM63BQ5T3F8 832 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 PACS1Q6VY07 963 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 TMEM26Q6ZUK4 368 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 PIK3C3Q8NEB9 887 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 AP3S1Q92572 193 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 DNAJC19Q96DA6 116 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 RTKNQ9BST9 563 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 RHOBTB2Q9BYZ6 727 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 ZCCHC2Q9C0B9 1178 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 WDCPQ9H6R7 721 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 NEK6Q9HC98 313 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 INPP5FQ9Y2H2 1132 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 KLHL20Q9Y2M5 609 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 ALKQ9UM73 1620 aa6.28□□□□□ -1.4
PRPF4B-205ENST00000480058 EFCAB10A6NFE3 127 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 RAD51BO15315 384 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 SKAP2O75563 359 aaPredicted RBP6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 PIGNO95427 931 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 GJB6O95452 261 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 ALOX15P16050 662 aaPredicted RBP6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 ERCC2P18074 760 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 PSMB9P28065 219 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 ST8SIA6P61647 398 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 FAAP100Q0VG06 881 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 NFIAQ12857 509 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 PRKG1Q13976 671 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 ANGPT1Q15389 498 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 NR6A1Q15406 480 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 CWF19L1Q69YN2 538 aaKnown RBP6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 TXNDC11Q6PKC3 985 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 METTL7BQ6UX53 244 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 BSNDQ8WZ55 320 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 MYLPFQ96A32 169 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 ACE2Q9BYF1 805 aaPredicted RBP6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 MROH8Q9H579 483 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 SENP2Q9HC62 589 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 CHST12Q9NRB3 414 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 RAD18Q9NS91 495 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 TBC1D30Q9Y2I9 924 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 TARBP1Q13395 1621 aaKnown RBP6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 GAKO14976 1311 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 MYPNQ86TC9 1320 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 M0QYT0 321 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 INPP4BO15327 924 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 KPNA6O60684 536 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 GUCA1CO95843 209 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 PDGFRBP09619 1106 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 NPR3P17342 541 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 CDH3P22223 829 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 DNAJB1P25685 340 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 KLK7P49862 253 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 GSCP56915 257 aaPredicted RBP6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 LAYNQ6UX15 382 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 CLYBLQ8N0X4 340 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 HM13Q8TCT9 377 aa6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 MRPL57Q9BQC6 102 aaKnown RBP6.27□□□□□ -1.41
PRPF4B-205ENST00000480058 PDGFCQ9NRA1 345 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms