RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 LUC7LQ9NQ29 371 aaKnown RBP11.18□□□□□ -0.62
ATG4B-219ENST00000479941 CTTNBP2NLQ9P2B4 639 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 IP6K2Q9UHH9 426 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 INTUQ9ULD6 942 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 KMT2EQ8IZD2 1858 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 KIAA1549LQ6ZVL6 1849 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 IGLV3-10A0A075B6K4 115 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 DRGXA6NNA5 263 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 EIF3CLB5ME19 914 aaKnown RBP11.17□□□□□ -0.62
ATG4B-219ENST00000479941 PRRT4C9JH25 899 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 E9PAM4 449 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 H0Y626 953 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 NPC1O15118 1278 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 LAMTOR5O43504 91 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 TIMM44O43615 452 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 SRGAP2O75044 1071 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 PAPSS2O95340 614 aaPredicted RBP11.17□□□□□ -0.62
ATG4B-219ENST00000479941 IPO7O95373 1038 aaKnown RBP11.17□□□□□ -0.62
ATG4B-219ENST00000479941 PCK1P35558 622 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 GGCXP38435 758 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 KIR2DL1P43626 348 aaPredicted RBP11.17□□□□□ -0.62
ATG4B-219ENST00000479941 CXCL12P48061 93 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 CDH4P55283 916 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 SEC13P55735 322 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 OXCT1P55809 520 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 ZNF252P-AS1Q0IIN9 211 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 SLC12A1Q13621 1099 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 SPA17Q15506 151 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 GEN1Q17RS7 908 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 C2orf27AQ580R0 203 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 EFHC2Q5JST6 749 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 KIAA0907Q7Z7F0 614 aaPredicted RBP11.17□□□□□ -0.62
ATG4B-219ENST00000479941 RHOT2Q8IXI1 618 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 ZNF683Q8IZ20 524 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 AHI1Q8N157 1196 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 CCAR2Q8N163 923 aaKnown RBP11.17□□□□□ -0.62
ATG4B-219ENST00000479941 CCDC185Q8N715 623 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 NIPA2Q8N8Q9 360 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 RPLP0P6Q8NHW5 317 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 USP33Q8TEY7 942 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 UCMAQ8WVF2 138 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 PPP1R9BQ96SB3 815 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 EIF3CQ99613 913 aaKnown RBP11.17□□□□□ -0.62
ATG4B-219ENST00000479941 BAG1Q99933 345 aaPredicted RBP11.17□□□□□ -0.62
ATG4B-219ENST00000479941 RETREG1Q9H6L5 497 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 TMPRSS4Q9NRS4 437 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 ABCB8Q9NUT2 735 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 KIAA1522Q9P206 1035 aaPredicted RBP11.17□□□□□ -0.62
ATG4B-219ENST00000479941 PPARGC1AQ9UBK2 798 aaKnown RBP11.17□□□□□ -0.62
ATG4B-219ENST00000479941 OR12D3Q9UGF7 316 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 ANAPC7Q9UJX3 599 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 GGA2Q9UJY4 613 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 FZD10Q9ULW2 581 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 HCN4Q9Y3Q4 1203 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 EPN1Q9Y6I3 576 aaPredicted RBP11.17□□□□□ -0.62
ATG4B-219ENST00000479941 CACNA1IQ9P0X4 2223 aa11.17□□□□□ -0.62
ATG4B-219ENST00000479941 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.16□□□□□ -0.62
ATG4B-219ENST00000479941 PRPSAP2O60256 369 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 LRCH4O75427 683 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 NDUFA10O95299 355 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 MOCS3O95396 460 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 PABPC1P11940 636 aaKnown RBP11.16□□□□□ -0.62
ATG4B-219ENST00000479941 HNRNPLP14866 589 aaKnown RBP eCLIP11.16□□□□□ -0.62
ATG4B-219ENST00000479941 MIPP30301 263 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 L1CAMP32004 1257 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 TIE1P35590 1138 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 MAGEA1P43355 309 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 ZNF177Q13360 481 aaPredicted RBP11.16□□□□□ -0.62
ATG4B-219ENST00000479941 DMC1Q14565 340 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 ANGPT1Q15389 498 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 ERMARDQ5T6L9 678 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 EMC10Q5UCC4 262 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 SYT13Q7L8C5 426 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 PSTKQ8IV42 348 aaKnown RBP11.16□□□□□ -0.62
ATG4B-219ENST00000479941 SFTPA1Q8IWL2 248 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 ARFGAP1Q8N6T3 406 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 ZNF513Q8N8E2 541 aaPredicted RBP11.16□□□□□ -0.62
ATG4B-219ENST00000479941 IL17RCQ8NAC3 791 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 WFDC5Q8TCV5 224 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 CIPCQ9C0C6 399 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 ZYG11BQ9C0D3 744 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 PRMT8Q9NR22 394 aaPredicted RBP11.16□□□□□ -0.62
ATG4B-219ENST00000479941 ELOVL2Q9NXB9 296 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 FBXO4Q9UKT5 387 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 MMP17Q9ULZ9 603 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 USP18Q9UMW8 372 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 SNX10Q9Y5X0 201 aa11.16□□□□□ -0.62
ATG4B-219ENST00000479941 MYO15AQ9UKN7 3530 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 SOWAHDA6NJG2 315 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 CNTN5O94779 1100 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 LRIG2O94898 1065 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 ATP5BP06576 529 aaKnown RBP11.15□□□□□ -0.62
ATG4B-219ENST00000479941 CHRM1P11229 460 aaPredicted RBP11.15□□□□□ -0.62
ATG4B-219ENST00000479941 POLR2EP19388 210 aaKnown RBP11.15□□□□□ -0.62
ATG4B-219ENST00000479941 NTSR1P30989 418 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 CD70P32970 193 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 HTR7P34969 479 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 ARHGAP25P42331 645 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 MRE11P49959 708 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 LMAN2Q12907 356 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms