RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 DPYSL4O14531 572 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 TRIM13O60858 407 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 VAPBO95292 243 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 DARSP14868 501 aaKnown RBP14.65□□□□□ -0.06
COL20A1-206ENST00000479501 CDC25CP30307 473 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 STX5Q13190 355 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 ZCCHC23Q6ZST2 131 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 DDHD1Q8NEL9 900 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 LRRN4Q8WUT4 740 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 PGLYRP2Q96PD5 576 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 NUDT5Q9UKK9 219 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 BLOC1S6Q9UL45 172 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 VPS9D1Q9Y2B5 631 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 DERAQ9Y315 318 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 CICQ96RK0 1608 aaPredicted RBP14.65□□□□□ -0.06
COL20A1-206ENST00000479501 MYH3P11055 1940 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 E9PBE3 544 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 KLHL41O60662 606 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 SHOX2O60902 331 aaPredicted RBP14.65□□□□□ -0.06
COL20A1-206ENST00000479501 PTPN7P35236 360 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 SERPINB5P36952 375 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 SLC1A6P48664 564 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 RGS4P49798 205 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 SP2Q02086 613 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 WASHC2DQ5SRD0 308 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 LAYNQ6UX15 382 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 KYAT3Q6YP21 454 aaKnown RBP14.65□□□□□ -0.06
COL20A1-206ENST00000479501 ARRDC4Q8NCT1 418 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 PLEKHO2Q8TD55 490 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 BHMTQ93088 406 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 ATXN3LQ9H3M9 355 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 GPAMQ9HCL2 828 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 GRHL1Q9NZI5 618 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 PKP3Q9Y446 797 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 C2orf81A6NN90 581 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 ERI2A8K979 691 aaKnown RBP14.65□□□□□ -0.06
COL20A1-206ENST00000479501 FZD9O00144 591 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 HOXA2O43364 376 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 PGK1P00558 417 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 MBTD1Q05BQ5 628 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 BFSP2Q13515 415 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 CSHL1Q14406 222 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 NOMO1Q15155 1222 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 C6orf10Q5SRN2 563 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 C9orf57Q5W0N0 161 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 IYDQ6PHW0 289 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 ILDR2Q71H61 639 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 ADCK1Q86TW2 530 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 PSTKQ8IV42 348 aaKnown RBP14.65□□□□□ -0.06
COL20A1-206ENST00000479501 CLEC4FQ8N1N0 589 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 B4GALNT2Q8NHY0 566 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 SNX19Q92543 992 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 OXNAD1Q96HP4 312 aaPredicted RBP14.65□□□□□ -0.06
COL20A1-206ENST00000479501 LGMNQ99538 433 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 FZD8Q9H461 694 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 SLCO1B3Q9NPD5 702 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 ATP11BQ9Y2G3 1177 aa14.65□□□□□ -0.06
COL20A1-206ENST00000479501 TCRBV9S1A1TA0A576 114 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 M0R3G1 203 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 MPOP05164 745 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 CD151P48509 253 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 ELAVL2Q12926 359 aaKnown RBP14.64□□□□□ -0.07
COL20A1-206ENST00000479501 CCDC153Q494R4 210 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 NUP93Q8N1F7 819 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 SLC4A11Q8NBS3 891 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 DCUN1D1Q96GG9 259 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 PRPF18Q99633 342 aaKnown RBP14.64□□□□□ -0.07
COL20A1-206ENST00000479501 GID8Q9NWU2 228 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 TUBGCP4Q9UGJ1 667 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 SH3BP1Q9Y3L3 701 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 AHDC1Q5TGY3 1603 aaPredicted RBP14.64□□□□□ -0.07
COL20A1-206ENST00000479501 SMIM35A0A1B0GVV1 85 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 BTBD19C9JJ37 291 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 SLCO1B7G3V0H7 640 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 MSCO60682 206 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 PIGRP01833 764 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 RBP1P09455 135 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 ERVK-10P10266 1014 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 ATP4AP20648 1035 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 HSPA13P48723 471 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 MRPS6P82932 125 aaKnown RBP14.64□□□□□ -0.07
COL20A1-206ENST00000479501 LBRQ14739 615 aaKnown RBP14.64□□□□□ -0.07
COL20A1-206ENST00000479501 C16orf46Q6P387 395 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 TTC33Q6PID6 262 aaPredicted RBP14.64□□□□□ -0.07
COL20A1-206ENST00000479501 OR52K1Q8NGK4 314 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 APBA2Q99767 749 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 EBNA1BP2Q99848 306 aaKnown RBP14.64□□□□□ -0.07
COL20A1-206ENST00000479501 TMEM109Q9BVC6 243 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 ASPSCR1Q9BZE9 553 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 A0A0G2JLL6 359 aaPredicted RBP14.64□□□□□ -0.07
COL20A1-206ENST00000479501 SMIM28A0A1B0GU29 152 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 GOLGA8TH3BQL2 631 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 RAMP2O60895 175 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 MMP3P08254 477 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 HIST1H2AGP0C0S8 130 aaPredicted RBP14.64□□□□□ -0.07
COL20A1-206ENST00000479501 HIST1H2ADP20671 130 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 DNAJB2P25686 324 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 QPCTQ16769 361 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 LRRC8BQ6P9F7 803 aa14.64□□□□□ -0.07
COL20A1-206ENST00000479501 PTAR1Q7Z6K3 402 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms