RNA–Protein interactions for RNA: ENST00000479384.1

CLOCK-204, Transcript of clock circadian regulator, humanhuman

TSL 2

Gene CLOCK, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-204ENST00000479384 RBL1P28749 1068 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 PDIA3P30101 505 aaKnown RBP3.8□□□□□ -1.8
CLOCK-204ENST00000479384 HTR7P34969 479 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 GPS1Q13098 491 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 DNASE1L3Q13609 305 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 FHL3Q13643 280 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 SPARCL1Q14515 664 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 PTGR1Q14914 329 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 TUBB8Q3ZCM7 444 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 ARHGAP15Q53QZ3 475 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 INO80DQ53TQ3 878 aaPredicted RBP3.8□□□□□ -1.8
CLOCK-204ENST00000479384 ARL6IP4Q66PJ3 421 aaKnown RBP3.8□□□□□ -1.8
CLOCK-204ENST00000479384 NUGGCQ68CJ6 796 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 P3H2Q8IVL5 708 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 MYCT1Q8N699 235 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.8□□□□□ -1.8
CLOCK-204ENST00000479384 ATG16L2Q8NAA4 619 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 LMLNQ96KR4 655 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 FAM227BQ96M60 508 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 GATA5Q9BWX5 397 aaPredicted RBP3.8□□□□□ -1.8
CLOCK-204ENST00000479384 LRFN1Q9P244 771 aa3.8□□□□□ -1.8
CLOCK-204ENST00000479384 HEMK1Q9Y5R4 338 aaPredicted RBP3.8□□□□□ -1.8
CLOCK-204ENST00000479384 AQP12BA6NM10 295 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 LGALS16A8MUM7 142 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 NPC1O15118 1278 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 SRGAP2BP0DMP2 458 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 PECAM1P16284 738 aaPredicted RBP3.79□□□□□ -1.8
CLOCK-204ENST00000479384 YY1P25490 414 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 RAE1P78406 368 aaKnown RBP3.79□□□□□ -1.8
CLOCK-204ENST00000479384 NSUN2Q08J23 767 aaKnown RBP eCLIP3.79□□□□□ -1.8
CLOCK-204ENST00000479384 SLC5A9Q2M3M2 681 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 CAPRIN2Q6IMN6 1127 aaKnown RBP3.79□□□□□ -1.8
CLOCK-204ENST00000479384 ADGRF4Q8IZF3 695 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 SPATA5Q8NB90 893 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 ABHD5Q8WTS1 349 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 ATP2A3Q93084 1043 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 TRIM63Q969Q1 353 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 GRAMD1AQ96CP6 724 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 RMDN3Q96TC7 470 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 PRPF18Q99633 342 aaKnown RBP3.79□□□□□ -1.8
CLOCK-204ENST00000479384 THSD1Q9NS62 852 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 DACT1Q9NYF0 836 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 IGSF9Q9P2J2 1179 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 ANAPC4Q9UJX5 808 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 AGO2Q9UKV8 859 aaKnown RBP3.79□□□□□ -1.8
CLOCK-204ENST00000479384 PCDHA7Q9UN72 937 aa3.79□□□□□ -1.8
CLOCK-204ENST00000479384 COL15A1P39059 1388 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 ZSCAN9O15535 394 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-204ENST00000479384 PIP5K1CO60331 668 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 UGDHO60701 494 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 TFEBP19484 476 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 MST1P26927 711 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 HOXA11P31270 313 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-204ENST00000479384 GRK6P43250 576 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 PPM1FP49593 454 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-204ENST00000479384 GALNT1Q10472 559 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-204ENST00000479384 MTAPQ13126 283 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 PTK2BQ14289 1009 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 PDXDC1Q6P996 788 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 TLDC1Q6P9B6 456 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 GATAD2AQ86YP4 633 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 SPATA2LQ8IUW3 424 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-204ENST00000479384 RASGRP3Q8IV61 690 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 FSTL5Q8N475 847 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-204ENST00000479384 NKAPQ8N5F7 415 aaKnown RBP3.78□□□□□ -1.8
CLOCK-204ENST00000479384 IQCF1Q8N6M8 205 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 MBD3L2Q8NHZ7 208 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-204ENST00000479384 FAM71BQ8TC56 605 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 STYXQ8WUJ0 223 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 NEUROG1Q92886 237 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 ZDHHC12Q96GR4 267 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 SCLT1Q96NL6 688 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 NTPCRQ9BSD7 190 aaKnown RBP3.78□□□□□ -1.8
CLOCK-204ENST00000479384 PAGR1Q9BTK6 254 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 RBM38Q9H0Z9 239 aaKnown RBP3.78□□□□□ -1.8
CLOCK-204ENST00000479384 CA14Q9ULX7 337 aa3.78□□□□□ -1.8
CLOCK-204ENST00000479384 SYT5O00445 386 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 TNFRSF13BO14836 293 aaPredicted RBP3.77□□□□□ -1.81
CLOCK-204ENST00000479384 ASNA1O43681 348 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 CREB3O43889 395 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 WDR47O94967 919 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 TNFRSF6BO95407 300 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 GLP2RO95838 553 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 VIPP01282 170 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 ARP10275 920 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 FGF3P11487 239 aaPredicted RBP3.77□□□□□ -1.81
CLOCK-204ENST00000479384 SLC5A2P31639 672 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 SERPINF1P36955 418 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 SOX2P48431 317 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 VPS41P49754 854 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 ATP1A4Q13733 1029 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 CNGA3Q16281 694 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 SMTNL2Q2TAL5 461 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 TTLL5Q6EMB2 1281 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 ABLIM2Q6H8Q1 611 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 TRAPPC11Q7Z392 1133 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 TTC30AQ86WT1 665 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 UEVLDQ8IX04 471 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 CACNA2D3Q8IZS8 1091 aa3.77□□□□□ -1.81
CLOCK-204ENST00000479384 MYRIPQ8NFW9 859 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms