RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 DMDP11532 3685 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 PABPC1P11940 636 aaKnown RBP15.98■□□□□ 0.15
C9orf3-217ENST00000479161 ADRA1BP35368 520 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 TIE1P35590 1138 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 SGSHP51688 502 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 HDAC4P56524 1084 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 RPS24P62847 133 aaKnown RBP15.98■□□□□ 0.15
C9orf3-217ENST00000479161 SCAPQ12770 1279 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 EMC10Q5UCC4 262 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 FBXL22Q6P050 247 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 DCUN1D2Q6PH85 259 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 ADIPOR2Q86V24 386 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 MFN1Q8IWA4 741 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 SFTPA1Q8IWL2 248 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 ZNF683Q8IZ20 524 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 ALLCQ8N6M5 410 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 TXNDC5Q8NBS9 432 aaKnown RBP15.98■□□□□ 0.15
C9orf3-217ENST00000479161 RBSNQ9H1K0 784 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 CD248Q9HCU0 757 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 POLMQ9NP87 494 aaPredicted RBP15.98■□□□□ 0.15
C9orf3-217ENST00000479161 ZNHIT6Q9NWK9 470 aaKnown RBP15.98■□□□□ 0.15
C9orf3-217ENST00000479161 C2orf42Q9NWW7 574 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 PPARGC1AQ9UBK2 798 aaKnown RBP15.98■□□□□ 0.15
C9orf3-217ENST00000479161 GGA2Q9UJY4 613 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 NENFQ9UMX5 172 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 TBC1D30Q9Y2I9 924 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 EML5Q05BV3 1969 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 CHD5Q8TDI0 1954 aa15.98■□□□□ 0.15
C9orf3-217ENST00000479161 OTOGLQ3ZCN5 2332 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 A0A087X0T9 212 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 CXorf51AA0A1B0GTR3 108 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 TMEM191CA6NGB0 347 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 EIF3CLB5ME19 914 aaKnown RBP15.97■□□□□ 0.15
C9orf3-217ENST00000479161 I6L893 689 aaPredicted RBP15.97■□□□□ 0.15
C9orf3-217ENST00000479161 SGK1O00141 431 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 MFAP3LO75121 409 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 ALDH1A2O94788 518 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 KLF8O95600 359 aaPredicted RBP15.97■□□□□ 0.15
C9orf3-217ENST00000479161 ASLP04424 464 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 FAM228BP0C875 321 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 CDH4P55283 916 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 RPL7AP62424 266 aaKnown RBP15.97■□□□□ 0.15
C9orf3-217ENST00000479161 CDH18Q13634 790 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 ASTE1Q2TB18 679 aaPredicted RBP15.97■□□□□ 0.15
C9orf3-217ENST00000479161 TMEM215Q68D42 235 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 ALKBH5Q6P6C2 394 aaKnown RBP15.97■□□□□ 0.15
C9orf3-217ENST00000479161 LRRC31Q6UY01 552 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 MYEOVQ96EZ4 313 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 EIF3CQ99613 913 aaKnown RBP15.97■□□□□ 0.15
C9orf3-217ENST00000479161 EPC1Q9H2F5 836 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 ABHD10Q9NUJ1 306 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 ABCB8Q9NUT2 735 aa15.97■□□□□ 0.15
C9orf3-217ENST00000479161 SYNJ2BP-COX16A0A087WUM0 186 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 AP5Z1O43299 807 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 DLDP09622 509 aaKnown RBP15.96■□□□□ 0.15
C9orf3-217ENST00000479161 SEC13P55735 322 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 ATP11AP98196 1134 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 SULT2A1Q06520 285 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 SLC18A3Q16572 532 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 ARTNQ5T4W7 220 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 EGFLAMQ63HQ2 1017 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 TSSK4Q6SA08 328 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 TMEM92Q6UXU6 159 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 SETD3Q86TU7 594 aaPredicted RBP15.96■□□□□ 0.15
C9orf3-217ENST00000479161 C11orf74Q86VG3 221 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 GAS2L3Q86XJ1 694 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 CHPFQ8IZ52 775 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 CCAR2Q8N163 923 aaKnown RBP15.96■□□□□ 0.15
C9orf3-217ENST00000479161 FAM172AQ8WUF8 416 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 RPRD1AQ96P16 312 aaPredicted RBP15.96■□□□□ 0.15
C9orf3-217ENST00000479161 MCEEQ96PE7 176 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 ANLNQ9NQW6 1124 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 COX16Q9P0S2 106 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 CNOT8Q9UFF9 292 aaKnown RBP15.96■□□□□ 0.15
C9orf3-217ENST00000479161 PLA2G4CQ9UP65 541 aa15.96■□□□□ 0.15
C9orf3-217ENST00000479161 ZFHX2Q9C0A1 2572 aaPredicted RBP15.96■□□□□ 0.15
C9orf3-217ENST00000479161 PTPRZ1P23471 2315 aaPredicted RBP15.95■□□□□ 0.14
C9orf3-217ENST00000479161 A0A1W2PQF6 199 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 AKR1B15C9JRZ8 316 aaPredicted RBP15.95■□□□□ 0.14
C9orf3-217ENST00000479161 H0Y626 953 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 MOCS3O95396 460 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 SRPRAP08240 638 aaKnown RBP15.95■□□□□ 0.14
C9orf3-217ENST00000479161 PLEKP08567 350 aaPredicted RBP15.95■□□□□ 0.14
C9orf3-217ENST00000479161 POLR2EP19388 210 aaKnown RBP15.95■□□□□ 0.14
C9orf3-217ENST00000479161 HTR7P34969 479 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 LMAN2Q12907 356 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 C15orf59Q2T9L4 293 aaPredicted RBP15.95■□□□□ 0.14
C9orf3-217ENST00000479161 MANEALQ5VSG8 457 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 ZNF783Q6ZMS7 281 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 METTL3Q86U44 580 aaKnown RBP15.95■□□□□ 0.14
C9orf3-217ENST00000479161 FAM131BQ86XD5 332 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 PSTKQ8IV42 348 aaKnown RBP15.95■□□□□ 0.14
C9orf3-217ENST00000479161 CFAP52Q8N1V2 620 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 CCDC33Q8N5R6 958 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 TSTD1Q8NFU3 115 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 WFDC5Q8TCV5 224 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 NKD2Q969F2 451 aaPredicted RBP15.95■□□□□ 0.14
C9orf3-217ENST00000479161 IGSF8Q969P0 613 aa15.95■□□□□ 0.14
C9orf3-217ENST00000479161 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.95■□□□□ 0.144e-6■■■■□ 23.2
C9orf3-217ENST00000479161 TMEM245Q9H330 911 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms