RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 CCDC174Q6PII3 467 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 RNF207Q6ZRF8 634 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 FAM109AQ8N4B1 249 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.6□□□□□ -1.35
SSR3-207ENST00000478842 GPRC5AQ8NFJ5 357 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 LPIN2Q92539 896 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 FAM136AQ96C01 138 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 KAZALD1Q96I82 304 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 FAM227BQ96M60 508 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 TTYH1Q9H313 450 aaPredicted RBP6.6□□□□□ -1.35
SSR3-207ENST00000478842 UNKLQ9H9P5 680 aaKnown RBP6.6□□□□□ -1.35
SSR3-207ENST00000478842 TBCCD1Q9NVR7 557 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 TMOD4Q9NZQ9 345 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 CA14Q9ULX7 337 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 MORC2Q9Y6X9 1032 aaPredicted RBP6.6□□□□□ -1.35
SSR3-207ENST00000478842 CDH23Q9H251 3354 aa6.6□□□□□ -1.35
SSR3-207ENST00000478842 GAKO14976 1311 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 FANCIQ9NVI1 1328 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 DDTLA6NHG4 134 aaPredicted RBP6.59□□□□□ -1.35
SSR3-207ENST00000478842 hCG_1984214I3L0E3 225 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 DNM1LO00429 736 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 SRGAP2O75044 1071 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 GATA3P23771 443 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 PDIA3P30101 505 aaKnown RBP6.59□□□□□ -1.35
SSR3-207ENST00000478842 CCND3P30281 292 aaPredicted RBP6.59□□□□□ -1.35
SSR3-207ENST00000478842 SLC5A2P31639 672 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 PTGS2P35354 604 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 PDE6CP51160 858 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 EFEMP1Q12805 493 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 SPP2Q13103 211 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 SPARCL1Q14515 664 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 PFKFB4Q16877 469 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 SLC5A9Q2M3M2 681 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 NRN1LQ496H8 165 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 LRRC24Q50LG9 513 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 HSP90AB4PQ58FF6 505 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.59□□□□□ -1.35
SSR3-207ENST00000478842 SPDYAQ5MJ70 313 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 CRTC1Q6UUV9 634 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 KIAA0408Q6ZU52 694 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 WDR63Q8IWG1 891 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 PPM1EQ8WY54 764 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 LPAR1Q92633 364 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 TRIM63Q969Q1 353 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 SCLT1Q96NL6 688 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 RMDN3Q96TC7 470 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 TPSD1Q9BZJ3 242 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 PCDHAC1Q9H158 963 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 AS3MTQ9HBK9 375 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 DKK2Q9UBU2 259 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 HPSEQ9Y251 543 aa6.59□□□□□ -1.35
SSR3-207ENST00000478842 MRPS17Q9Y2R5 130 aaKnown RBP6.59□□□□□ -1.35
SSR3-207ENST00000478842 C19orf81C9J6K1 198 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 SYT5O00445 386 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 CD3EAPO15446 510 aaKnown RBP6.58□□□□□ -1.36
SSR3-207ENST00000478842 ATICP31939 592 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 BCAT1P54687 386 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 HMGCS2P54868 508 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 IRX3P78415 501 aaPredicted RBP6.58□□□□□ -1.36
SSR3-207ENST00000478842 ADAM17P78536 824 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 SLC25A3Q00325 362 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 ITIH3Q06033 890 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 PTK2BQ14289 1009 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 TUBB8Q3ZCM7 444 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 SPATS1Q496A3 300 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 KCTD20Q7Z5Y7 419 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 CCDC28AQ8IWP9 274 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 MYRIPQ8NFW9 859 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 FAM71BQ8TC56 605 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 HAS1Q92839 578 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 LENG9Q96B70 501 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 C18orf8Q96DM3 657 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 ZDHHC12Q96GR4 267 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 PLEKHG4BQ96PX9 1271 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 ADAM2Q99965 735 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 AMBRA1Q9C0C7 1298 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 MYLK2Q9H1R3 596 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 DNAJB11Q9UBS4 358 aa6.58□□□□□ -1.36
SSR3-207ENST00000478842 PDS5AQ29RF7 1337 aaKnown RBP6.57□□□□□ -1.36
SSR3-207ENST00000478842 NCOR1O75376 2440 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 LGALS16A8MUM7 142 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 NPC1O15118 1278 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 CCNT2O60583 730 aaKnown RBP6.57□□□□□ -1.36
SSR3-207ENST00000478842 GLP2RO95838 553 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 HOXC6P09630 235 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 NR4A1P22736 598 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 EPHA3P29320 983 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 PPM1FP49593 454 aaPredicted RBP6.57□□□□□ -1.36
SSR3-207ENST00000478842 ITGA8P53708 1063 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 POLE2P56282 527 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 NXPH1P58417 271 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 NSUN2Q08J23 767 aaKnown RBP eCLIP6.57□□□□□ -1.36
SSR3-207ENST00000478842 FOXO1Q12778 655 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 CDSNQ15517 529 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 TMEM95Q3KNT9 176 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 C9orf50Q5SZB4 431 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 AKNAD1Q5T1N1 836 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 TEDDM1Q5T9Z0 273 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 VPS53Q5VIR6 699 aa6.57□□□□□ -1.36
SSR3-207ENST00000478842 MANEALQ5VSG8 457 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms