RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 FAM217AQ8IXS0 508 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 RDH13Q8NBN7 331 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 SMARCD1Q96GM5 515 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 ANKRD36BP1Q96IX9 119 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 NOX5Q96PH1 765 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 OMDQ99983 421 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 FGFBP2Q9BYJ0 223 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 ADNPQ9H2P0 1102 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 CYTH4Q9UIA0 394 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 ANAPC2Q9UJX6 822 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 GGA2Q9UJY4 613 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 FZD4Q9ULV1 537 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 PLA2G4CQ9UP65 541 aa12.77□□□□□ -0.37
HDAC8-217ENST00000478743 CSMD2Q7Z408 3487 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.76□□□□□ -0.37
HDAC8-217ENST00000478743 TIMM44O43615 452 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 KRT7P08729 469 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 DLDP09622 509 aaKnown RBP12.76□□□□□ -0.37
HDAC8-217ENST00000478743 PABPC1P11940 636 aaKnown RBP12.76□□□□□ -0.37
HDAC8-217ENST00000478743 SLC8A1P32418 973 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 UGT1A5P35504 534 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 CHKAP35790 457 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 MLLT3P42568 568 aaPredicted RBP12.76□□□□□ -0.37
HDAC8-217ENST00000478743 CASP5P51878 434 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 KCNMA1Q12791 1236 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 ZNF177Q13360 481 aaPredicted RBP12.76□□□□□ -0.37
HDAC8-217ENST00000478743 MANEAQ5SRI9 462 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 C9orf64Q5T6V5 341 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 IQCHQ86VS3 1027 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 SLC22A18ASQ8N1D0 253 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 CPXM2Q8N436 756 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.76□□□□□ -0.37
HDAC8-217ENST00000478743 SPATA20Q8TB22 786 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 SSC4DQ8WTU2 575 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 MRGPRX3Q96LB0 322 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 STRA6Q9BX79 667 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 SLC2A11Q9BYW1 496 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 SDCBP2Q9H190 292 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 KDM4CQ9H3R0 1056 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 ST6GALNAC4Q9H4F1 302 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 FZD3Q9NPG1 666 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 COMMD8Q9NX08 183 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 FOXJ2Q9P0K8 574 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 HMGXB4Q9UGU5 601 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 ACSL6Q9UKU0 697 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 SCML2Q9UQR0 700 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 PCDHGA7Q9Y5G6 932 aa12.76□□□□□ -0.37
HDAC8-217ENST00000478743 ZNF106Q9H2Y7 1883 aaKnown RBP12.76□□□□□ -0.37
HDAC8-217ENST00000478743 FBN3Q75N90 2809 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 TBC1D3DA0A087WVF3 549 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 TBC1D3IA0A087WXS9 549 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 TBC1D3EA0A087X179 549 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 TBC1D3KA0A087X1G2 549 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 TBC1D3FA6NER0 549 aaPredicted RBP12.75□□□□□ -0.37
HDAC8-217ENST00000478743 TBC1D3LB9A6J9 549 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 PLD2O14939 933 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 CLDN1O95832 211 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 CYBBP04839 570 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 TBC1D3HP0C7X1 549 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 GNLYP22749 145 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 MLLT10P55197 1068 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 EFEMP1Q12805 493 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 HS1BP3Q53T59 392 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 SDK2Q58EX2 2172 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 TBC1D3GQ6DHY5 549 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 TBC1D3CQ6IPX1 549 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 KLHDC10Q6PID8 442 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 TBC1D3Q8IZP1 549 aaPredicted RBP12.75□□□□□ -0.37
HDAC8-217ENST00000478743 OR13H1Q8NG92 308 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 WFIKKN2Q8TEU8 576 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 FAM129BQ96TA1 746 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 SLC12A9Q9BXP2 914 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 FOXP1Q9H334 677 aaPredicted RBP12.75□□□□□ -0.37
HDAC8-217ENST00000478743 SYNDIG1Q9H7V2 258 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 EPB41L5Q9HCM4 733 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 CSNK1G1Q9HCP0 422 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 SCML1Q9UN30 329 aa12.75□□□□□ -0.37
HDAC8-217ENST00000478743 ATP8B3O60423 1300 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 PRAMEF33A0A0G2JMD5 474 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 TTC34A8MYJ7 566 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 SCAMP1O15126 338 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 PRAMEF10O60809 474 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 TBCAO75347 108 aaKnown RBP12.74□□□□□ -0.37
HDAC8-217ENST00000478743 TNNC2P02585 160 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 PRLRP16471 622 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 ITIH1P19827 911 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 SCP2P22307 547 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 ETV5P41161 510 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 CTSOP43234 321 aaPredicted RBP12.74□□□□□ -0.37
HDAC8-217ENST00000478743 IRX6P78412 446 aaPredicted RBP12.74□□□□□ -0.37
HDAC8-217ENST00000478743 POSTNQ15063 836 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 E2F5Q15329 346 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 HNRNPA1L2Q32P51 320 aaKnown RBP12.74□□□□□ -0.37
HDAC8-217ENST00000478743 WDR72Q3MJ13 1102 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 C1QL3Q5VWW1 255 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 SCARA5Q6ZMJ2 495 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 DTHD1Q6ZMT9 781 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 RSRC2Q7L4I2 434 aaKnown RBP12.74□□□□□ -0.37
HDAC8-217ENST00000478743 ZNF720Q7Z2F6 126 aa12.74□□□□□ -0.37
HDAC8-217ENST00000478743 TRAPPC11Q7Z392 1133 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms