RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 SETMARQ53H47 684 aaPredicted RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 RAB12Q6IQ22 244 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 RFX8Q6ZV50 586 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 TRABD2AQ86V40 505 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 FAM228AQ86W67 206 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 SPATS2Q86XZ4 545 aaKnown RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 CKAP2Q8WWK9 683 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 SLCO2A1Q92959 643 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 NCLNQ969V3 563 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 PAFAH2Q99487 392 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 SGIP1Q9BQI5 828 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 OBP2AQ9NY56 170 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 MARCOQ9UEW3 520 aaPredicted RBP6.25□□□□□ -1.41
SH3D19-207ENST00000478503 PCDHB8Q9UN66 801 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 TNFSF13BQ9Y275 285 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 NME7Q9Y5B8 376 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 RLFQ13129 1914 aa6.25□□□□□ -1.41
SH3D19-207ENST00000478503 IGKV6-21A0A0C4DH24 114 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 A8MXQ7 604 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 KBTBD13C9JR72 458 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 CLDN5O00501 218 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 ATP9BO43861 1147 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 B4GALT4O60513 344 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 TSC22D2O75157 780 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 TRUB2O95900 331 aaKnown RBP6.24□□□□□ -1.41
SH3D19-207ENST00000478503 THEGLP0DJG4 465 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 KITP10721 976 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 HSPA8P11142 646 aaKnown RBP6.24□□□□□ -1.41
SH3D19-207ENST00000478503 OSBPP22059 807 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 GBE1Q04446 702 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 LRRC74AQ0VAA2 488 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 STAT4Q14765 748 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 TBC1D25Q3MII6 688 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 PAN2Q504Q3 1202 aaKnown RBP6.24□□□□□ -1.41
SH3D19-207ENST00000478503 CASC4Q6P4E1 433 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 ARHGAP11AQ6P4F7 1023 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 CORO6Q6QEF8 472 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 FAM131BQ86XD5 332 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 ECHDC2Q86YB7 292 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 SLC35B2Q8TB61 432 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.24□□□□□ -1.41
SH3D19-207ENST00000478503 SLC5A4Q9NY91 659 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 EMC3Q9P0I2 261 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 KLHL14Q9P2G3 628 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 HAO1Q9UJM8 370 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 PHTF1Q9UMS5 762 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 DNMT3AQ9Y6K1 912 aaPredicted RBP6.24□□□□□ -1.41
SH3D19-207ENST00000478503 KIF13BQ9NQT8 1826 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 MED7O43513 233 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 TSPAN1O60635 241 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 LSM8O95777 96 aaKnown RBP6.24□□□□□ -1.41
SH3D19-207ENST00000478503 KRT7P08729 469 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 ESRRAP11474 423 aaPredicted RBP6.24□□□□□ -1.41
SH3D19-207ENST00000478503 SMPD1P17405 629 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 PROZP22891 400 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 EPHX2P34913 555 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 IDUAP35475 653 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 MSH2P43246 934 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 GTF2A2P52657 109 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 IL9RQ01113 521 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 ASPHQ12797 758 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 SQSTM1Q13501 440 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 LRP8Q14114 963 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 DPYSL3Q14195 570 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 GRIK4Q16099 956 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 ACCSLQ4AC99 568 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 MDH1BQ5I0G3 518 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 CES3Q6UWW8 571 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 SYDE1Q6ZW31 735 aaPredicted RBP6.24□□□□□ -1.41
SH3D19-207ENST00000478503 PLPPR4Q7Z2D5 763 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 GALNTL5Q7Z4T8 443 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 LRRC6Q86X45 466 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 TP53INP2Q8IXH6 220 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 PDIK1LQ8N165 341 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 C10orf53Q8N6V4 93 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 RNF169Q8NCN4 708 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 TCP10LQ8TDR4 215 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 DNAJB3Q8WWF6 145 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 FAM111AQ96PZ2 611 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 MECRQ9BV79 373 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 ETNK1Q9HBU6 452 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 PRMT7Q9NVM4 692 aaPredicted RBP6.24□□□□□ -1.41
SH3D19-207ENST00000478503 LMCD1Q9NZU5 365 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 ATPIF1Q9UII2 106 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 CCL15-CCL14A0A0B4J2E2 113 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 MEIS3P2A8K0S8 358 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 ZW10O43264 779 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 RASSF9O75901 435 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 SLC25A27O95847 323 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 KRT16P08779 473 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 GPD1P21695 349 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 ABCG1P45844 678 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 ARL4CP56559 192 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 BCAR1P56945 870 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 ELF3P78545 371 aaPredicted RBP6.24□□□□□ -1.41
SH3D19-207ENST00000478503 CAV1Q03135 178 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 FAAP100Q0VG06 881 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 CCL15Q16663 113 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 BOLA3Q53S33 107 aa6.24□□□□□ -1.41
SH3D19-207ENST00000478503 TNFAIP8L3Q5GJ75 292 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms