RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 KCND3Q9UK17 655 aa4.41□□□□□ -1.7
SMARCA1-204ENST00000478420 COPG1Q9Y678 874 aaKnown RBP4.41□□□□□ -1.7
SMARCA1-204ENST00000478420 CYP2D7A0A087X1C5 515 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 E7EVH7 732 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 BCAR3O75815 825 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 KRT38O76015 456 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 HEXIM1O94992 359 aaKnown RBP4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 ALDOCP09972 364 aaKnown RBP4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 RFPL3SP0C7P2 107 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 ST6GAL1P15907 406 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 TGM2P21980 687 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 HOXA7P31268 230 aaPredicted RBP4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 SOX2P48431 317 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 SLC12A2P55011 1212 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 ARL4CP56559 192 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 SHC2P98077 582 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 STIM1Q13586 685 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 CUL4BQ13620 913 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 TAF5Q15542 800 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 ANKRD45Q5TZF3 282 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 LDHAL6AQ6ZMR3 332 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 MOGAT3Q86VF5 341 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 RHPN2Q8IUC4 686 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 ADGRF3Q8IZF5 1079 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 SLC2A12Q8TD20 617 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 CSGALNACT1Q8TDX6 532 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 CLEC4CQ8WTT0 213 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 CUL5Q93034 780 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 SDCCAG3Q96C92 435 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 PRSS22Q9GZN4 317 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 PDE11AQ9HCR9 933 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 IPO11Q9UI26 975 aaKnown RBP4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 LZTS1Q9Y250 596 aa4.4□□□□□ -1.71
SMARCA1-204ENST00000478420 SLC22A23A1A5C7 686 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 KCNU1A8MYU2 1149 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 OVOL3O00110 214 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 HNRNPRO43390 633 aaKnown RBP4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 TFEBP19484 476 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 ABCG1P45844 678 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 MCM2P49736 904 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 RBM5P52756 815 aaKnown RBP eCLIP4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 CFHR1Q03591 330 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 PDCLQ13371 301 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 SMAD1Q15797 465 aaKnown RBP4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 GPR162Q16538 588 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 SLC9C1Q4G0N8 1177 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 MTX3Q5HYI7 312 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 COLEC12Q5KU26 742 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 ZNF474Q6S9Z5 364 aaPredicted RBP4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 SYT13Q7L8C5 426 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 UBE2Q1Q7Z7E8 422 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 FAM47BQ8NA70 645 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 SPPL3Q8TCT6 385 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 BCAS4Q8TDM0 211 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 AFG1LQ8WV93 481 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 ZFPM2Q8WW38 1151 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 OSBPL5Q9H0X9 879 aaPredicted RBP4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 ABHD16BQ9H3Z7 469 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 MLXIPLQ9NP71 852 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 G6PC2Q9NQR9 355 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 ITM2CQ9NQX7 267 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 PCDHGB3Q9Y5G1 929 aa4.39□□□□□ -1.71
SMARCA1-204ENST00000478420 TP73O15350 636 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 SEPT4O43236 478 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 CREB3O43889 395 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 TFRCP02786 760 aaKnown RBP4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 CYP21A2P08686 494 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 CPA2P48052 419 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 PPM1FP49593 454 aaPredicted RBP4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 ACTR2P61160 394 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 RPS13P62277 151 aaKnown RBP4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 ID2Q02363 134 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 ZNF91Q05481 1191 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 PPFIA1Q13136 1202 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 DCTN1Q14203 1278 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 TRIP6Q15654 476 aaKnown RBP4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 EARS2Q5JPH6 523 aaKnown RBP4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 LIPMQ5VYY2 423 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 MORN5Q5VZ52 161 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 ZNF626Q68DY1 528 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 SLC2A7Q6PXP3 512 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 FTSJ3Q8IY81 847 aaKnown RBP4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 ENDOVQ8N8Q3 282 aaKnown RBP4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 FSIP1Q8NA03 581 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 PRSS3P2Q8NHM4 247 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 ARRDC3Q96B67 414 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 SIGLEC11Q96RL6 698 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 ZNF347Q96SE7 839 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 NPAS1Q99742 590 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 TWSG1Q9GZX9 223 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 SLC8A2Q9UPR5 921 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 ZNF804BA4D1E1 1349 aa4.38□□□□□ -1.71
SMARCA1-204ENST00000478420 LMTK3Q96Q04 1460 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 FAM90A20PA6NIJ5 464 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 C2CD4BA6NLJ0 364 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 E5RJQ4 531 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 GRM8O00222 908 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 TK1P04183 234 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 CCT5P48643 541 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 B4GALNT1Q00973 533 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms