RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 DFNA5O60443 496 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 SLC6A4P31645 630 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 CSNK1EP49674 416 aaKnown RBP13.48□□□□□ -0.25
ABCF3-212ENST00000478288 RGS7P49802 495 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 SCAPQ12770 1279 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 HNRNPA1L2Q32P51 320 aaKnown RBP13.48□□□□□ -0.25
ABCF3-212ENST00000478288 RFWD3Q6PCD5 774 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 SLCO6A1Q86UG4 719 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 PPM1KQ8N3J5 372 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 ZNF366Q8N895 744 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 WFDC5Q8TCV5 224 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 STK32AQ8WU08 396 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 SNX19Q92543 992 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 SLC39A13Q96H72 371 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 FCRL2Q96LA5 508 aaPredicted RBP13.48□□□□□ -0.25
ABCF3-212ENST00000478288 PRICKLE1Q96MT3 831 aaPredicted RBP13.48□□□□□ -0.25
ABCF3-212ENST00000478288 ORAI3Q9BRQ5 295 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 PABPC3Q9H361 631 aaKnown RBP13.48□□□□□ -0.25
ABCF3-212ENST00000478288 DKK4Q9UBT3 224 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 TPX2Q9ULW0 747 aaKnown RBP13.48□□□□□ -0.25
ABCF3-212ENST00000478288 CNTN6Q9UQ52 1028 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 ANKRD6Q9Y2G4 727 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 SLCO1B1Q9Y6L6 691 aa13.48□□□□□ -0.25
ABCF3-212ENST00000478288 ITIH6Q6UXX5 1313 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 TARSL2A2RTX5 802 aaKnown RBP13.47□□□□□ -0.25
ABCF3-212ENST00000478288 RNF225M0QZC1 329 aaPredicted RBP13.47□□□□□ -0.25
ABCF3-212ENST00000478288 FYNP06241 537 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 SRPRAP08240 638 aaKnown RBP13.47□□□□□ -0.25
ABCF3-212ENST00000478288 GRK6P43250 576 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 ACADSBP45954 432 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 CCT8P50990 548 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 MARSP56192 900 aaKnown RBP13.47□□□□□ -0.25
ABCF3-212ENST00000478288 ST8SIA6P61647 398 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 INAVAQ3KP66 663 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 MS4A13Q5J8X5 152 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 SMYD5Q6GMV2 418 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 NADSYN1Q6IA69 706 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 TTI2Q6NXR4 508 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 LRSAM1Q6UWE0 723 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 TMPRSS7Q7RTY8 843 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 PNPLA1Q8N8W4 532 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 DQX1Q8TE96 717 aaKnown RBP13.47□□□□□ -0.25
ABCF3-212ENST00000478288 CLEC4CQ8WTT0 213 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 ADAMTS1Q9UHI8 967 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 FZD4Q9ULV1 537 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 NCKAP1Q9Y2A7 1128 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 SNX11Q9Y5W9 270 aa13.47□□□□□ -0.25
ABCF3-212ENST00000478288 GOLGA6L7A0A1B0GV03 622 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 BICDL2A1A5D9 508 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 TNFSF14O43557 240 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 RNASEH1O60930 286 aaKnown RBP13.46□□□□□ -0.25
ABCF3-212ENST00000478288 GNA14O95837 355 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 IGHV4-34P06331 123 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 BRD2P25440 801 aaKnown RBP13.46□□□□□ -0.25
ABCF3-212ENST00000478288 CSKP41240 450 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 CTSKP43235 329 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 GPD2P43304 727 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 RACK1P63244 317 aaKnown RBP13.46□□□□□ -0.25
ABCF3-212ENST00000478288 CDH18Q13634 790 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 CCDC40Q4G0X9 1142 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 KIAA0895LQ68EN5 471 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 CCDC117Q8IWD4 279 aaPredicted RBP13.46□□□□□ -0.25
ABCF3-212ENST00000478288 GALNT15Q8N3T1 639 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 KAT5Q92993 513 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 MRGPRX3Q96LB0 322 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 CCDC86Q9H6F5 360 aaKnown RBP13.46□□□□□ -0.25
ABCF3-212ENST00000478288 INTS6Q9UL03 887 aaKnown RBP13.46□□□□□ -0.25
ABCF3-212ENST00000478288 LHX6Q9UPM6 363 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 GPSM3Q9Y4H4 160 aa13.46□□□□□ -0.25
ABCF3-212ENST00000478288 EDDM13A0A1B0GTR0 161 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 A0A1W2PPC4 97 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 PIK3R2O00459 728 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 VILLO15195 856 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 SIN3BO75182 1162 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 LUC7L3O95232 432 aaKnown RBP13.45□□□□□ -0.26
ABCF3-212ENST00000478288 MOCS3O95396 460 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 IGLV3-25P01717 112 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 CD44P16070 742 aaKnown RBP13.45□□□□□ -0.26
ABCF3-212ENST00000478288 RPS24P62847 133 aaKnown RBP13.45□□□□□ -0.26
ABCF3-212ENST00000478288 SLC12A1Q13621 1099 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 CST6Q15828 149 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 PITRM1Q5JRX3 1037 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 C9orf64Q5T6V5 341 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 TRIM59Q8IWR1 403 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 RHBDD1Q8TEB9 315 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 ERCC4Q92889 916 aaPredicted RBP13.45□□□□□ -0.26
ABCF3-212ENST00000478288 SKA1Q96BD8 255 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 SLC4A5Q9BY07 1137 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 ACE2Q9BYF1 805 aaPredicted RBP13.45□□□□□ -0.26
ABCF3-212ENST00000478288 NUCKS1Q9H1E3 243 aaKnown RBP13.45□□□□□ -0.26
ABCF3-212ENST00000478288 FBXL12Q9NXK8 326 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 MAN1B1Q9UKM7 699 aa13.45□□□□□ -0.26
ABCF3-212ENST00000478288 HELZ2Q9BYK8 2649 aaKnown RBP13.44□□□□□ -0.26
ABCF3-212ENST00000478288 PTPRQQ9UMZ3 2332 aa13.44□□□□□ -0.26
ABCF3-212ENST00000478288 LRRC72A6NJI9 287 aa13.44□□□□□ -0.26
ABCF3-212ENST00000478288 KALRNO60229 2985 aa13.44□□□□□ -0.26
ABCF3-212ENST00000478288 FSBPO95073 299 aa13.44□□□□□ -0.26
ABCF3-212ENST00000478288 ADH1BP00325 375 aa13.44□□□□□ -0.26
ABCF3-212ENST00000478288 APOEP02649 317 aa13.44□□□□□ -0.26
ABCF3-212ENST00000478288 ATXN1LP0C7T5 689 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms