RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ATP5BP06576 529 aaKnown RBP7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 CENPBP07199 599 aaPredicted RBP7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 WT1P19544 449 aaPredicted RBP7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 SLC5A2P31639 672 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 SLC8A1P32418 973 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 DDIT3P35638 169 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 PDX1P52945 283 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 MAP3K7CLP57077 242 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 CYP4F2P78329 520 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 STAT4Q14765 748 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 ARID5BQ14865 1188 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 HNRNPA1L2Q32P51 320 aaKnown RBP7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 MPPE1Q53F39 396 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 MBLAC2Q68D91 279 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 FOXR1Q6PIV2 292 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 RBM44Q6ZP01 1051 aaKnown RBP7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 SND1Q7KZF4 910 aaKnown RBP eCLIP7.64□□□□□ -1.196e-6■□□□□ 10.4
SPTLC1-205ENST00000477888 C14orf80Q86SX3 495 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 TADA2BQ86TJ2 420 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 PRPF39Q86UA1 669 aaKnown RBP7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 SFR1Q86XK3 245 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 CBWD2Q8IUF1 395 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 WDR49Q8IV35 697 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 MMAAQ8IVH4 418 aaKnown RBP7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 PLPP6Q8IY26 295 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 AHI1Q8N157 1196 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 GPD1LQ8N335 351 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 AADATQ8N5Z0 425 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 OR14C36Q8NHC7 312 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 RAD54LQ92698 747 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 ARRDC3Q96B67 414 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 TNIP3Q96KP6 325 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 ACCSQ96QU6 501 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 FAM129BQ96TA1 746 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 OMDQ99983 421 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 XYLT2Q9H1B5 865 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 PCIF1Q9H4Z3 704 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 ABCB8Q9NUT2 735 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 GGA2Q9UJY4 613 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 DMTF1Q9Y222 760 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 PLAAQ9Y263 795 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 PCDHGA4Q9Y5G9 962 aa7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 SPTBN1Q01082 2364 aaKnown RBP7.64□□□□□ -1.19
SPTLC1-205ENST00000477888 ICE1Q9Y2F5 2266 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TCHHQ07283 1943 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TBC1D3DA0A087WVF3 549 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TBC1D3IA0A087WXS9 549 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TBC1D3EA0A087X179 549 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TBC1D3KA0A087X1G2 549 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 EME2A4GXA9 379 aaPredicted RBP7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TBC1D3FA6NER0 549 aaPredicted RBP7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 ZNF233A6NK53 670 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TBC1D3LB9A6J9 549 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 CASC3O15234 703 aaKnown RBP7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 RNASEH1O60930 286 aaKnown RBP7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TCEA3O75764 348 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 PIAS2O75928 621 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 HMBSP08397 361 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TBC1D3HP0C7X1 549 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 PABPC1P11940 636 aaKnown RBP7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 CCDC130P13994 396 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 NUDT1P36639 197 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 CD97P48960 835 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 CASP5P51878 434 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 KIF11P52732 1056 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TNNC1P63316 161 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 KCNMA1Q12791 1236 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 GNL2Q13823 731 aaKnown RBP7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 SURF1Q15526 300 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TBC1D3GQ6DHY5 549 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TBC1D3CQ6IPX1 549 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 ACOT1Q86TX2 421 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TBC1D3Q8IZP1 549 aaPredicted RBP7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 CRYBG2Q8N1P7 616 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TMEM145Q8NBT3 493 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TPCN2Q8NHX9 752 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 SPATA20Q8TB22 786 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 SLC2A14Q8TDB8 520 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 TTC17Q96AE7 1141 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 FAM131CQ96AQ9 280 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 MIB2Q96AX9 1013 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 KLHDC7BQ96G42 594 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 LMLNQ96KR4 655 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 MRGPRX3Q96LB0 322 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 DUSP23Q9BVJ7 150 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 MRPL44Q9H9J2 332 aaKnown RBP7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 CLIC5Q9NZA1 410 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 CYTH4Q9UIA0 394 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 ANAPC2Q9UJX6 822 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 NAGPAQ9UK23 515 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 CA5BQ9Y2D0 317 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 KIF3AQ9Y496 699 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 PCDHA5Q9Y5H7 936 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 USP3Q9Y6I4 520 aa7.63□□□□□ -1.19
SPTLC1-205ENST00000477888 CCDC187A0A096LP49 1063 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 SLC12A8A0AV02 714 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 TARSL2A2RTX5 802 aaKnown RBP7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 NEMP2A6NFY4 417 aa7.62□□□□□ -1.19
SPTLC1-205ENST00000477888 PRAMEF26H0Y7S4 382 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms