RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 PIAS3Q9Y6X2 628 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 MGAQ8IWI9 3026 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 PTPRBP23467 1997 aa5□□□□□ -1.61
CKS1B-207ENST00000477676 KNTC1P50748 2209 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 SLC38A8A6NNN8 435 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 HEPACAM2A8MVW5 462 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 MARCH6O60337 910 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 NEMFO60524 1076 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 PAPSS2O95340 614 aaPredicted RBP4.99□□□□□ -1.61
CKS1B-207ENST00000477676 BAG4O95429 457 aaKnown RBP4.99□□□□□ -1.61
CKS1B-207ENST00000477676 SCG5P05408 212 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 OR4Q2P0C623 313 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 PSMC3P17980 439 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 CYP11B2P19099 503 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 ATP2B1P20020 1258 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 PROZP22891 400 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 KRT2P35908 639 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 ARPP19P56211 112 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 OSTNP61366 133 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 TWF1Q12792 350 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 ADAM9Q13443 819 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 TEAD2Q15562 447 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 CSRP2Q16527 193 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 MAPK6Q16659 721 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 EMC4Q5J8M3 183 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 N4BP2L1Q5TBK1 243 aaPredicted RBP4.99□□□□□ -1.61
CKS1B-207ENST00000477676 ATF7IP2Q5U623 682 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 VASNQ6EMK4 673 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 PDXDC1Q6P996 788 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 TEPPQ6URK8 271 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 ANKS3Q6ZW76 656 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 GAREM2Q75VX8 874 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 CENPQQ7L2Z9 268 aaPredicted RBP4.99□□□□□ -1.61
CKS1B-207ENST00000477676 RTL10Q7L3V2 364 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 MFSD6LQ8IWD5 586 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 ZBTB8OSQ8IWT0 167 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 CELF5Q8N6W0 485 aaKnown RBP4.99□□□□□ -1.61
CKS1B-207ENST00000477676 C4orf32Q8N8J7 132 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 NSUN7Q8NE18 718 aaKnown RBP4.99□□□□□ -1.61
CKS1B-207ENST00000477676 MCPH1Q8NEM0 835 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 BEST2Q8NFU1 509 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 TTC8Q8TAM2 541 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 Q8TCH9 128 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 BTN2A2Q8WVV5 523 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 FAM3CQ92520 227 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 ACO2Q99798 780 aaKnown RBP4.99□□□□□ -1.61
CKS1B-207ENST00000477676 POLR3CQ9BUI4 534 aaPredicted RBP4.99□□□□□ -1.61
CKS1B-207ENST00000477676 TRMT61BQ9BVS5 477 aaKnown RBP4.99□□□□□ -1.61
CKS1B-207ENST00000477676 HAPLN2Q9GZV7 340 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 CYP4F11Q9HBI6 524 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 ZFP14Q9HCL3 533 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 TRPV5Q9NQA5 729 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 PDRG1Q9NUG6 133 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 GMEB2Q9UKD1 530 aa4.99□□□□□ -1.61
CKS1B-207ENST00000477676 ASH1LQ9NR48 2969 aaKnown RBP4.98□□□□□ -1.61
CKS1B-207ENST00000477676 TENM4Q6N022 2769 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 TCRBV5S2A0A599 114 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 MYBPHLA2RUH7 354 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 ANTXRLA6NF34 631 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 PODXLO00592 558 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 MAN2B1O00754 1011 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 PRRG1O14668 218 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 PPEF2O14830 753 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 NCAM2O15394 837 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 EXTL3O43909 919 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 LRP3O75074 770 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 SOAT2O75908 522 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 PRAMEF12O95522 483 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 TOP3BO95985 862 aaKnown RBP4.98□□□□□ -1.61
CKS1B-207ENST00000477676 LRG1P02750 347 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 ITGAVP06756 1048 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 MYL4P12829 197 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 KCNE1P15382 129 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 RPA1P27694 616 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 MCM7P33993 719 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 NAMPTP43490 491 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 NPTX2P47972 431 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 CXCL12P48061 93 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 PXNP49023 591 aaPredicted RBP4.98□□□□□ -1.61
CKS1B-207ENST00000477676 CCR3P51677 355 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 GUCY2FP51841 1108 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 GUCY1B3Q02153 619 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 SPAG1Q07617 926 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 FCHO2Q0JRZ9 810 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 NFATC3Q12968 1075 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 MAPK7Q13164 816 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 SIM2Q14190 667 aaPredicted RBP4.98□□□□□ -1.61
CKS1B-207ENST00000477676 PON2Q15165 354 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 TESK1Q15569 626 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 IL17AQ16552 155 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 ME3Q16798 604 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 SLC10A6Q3KNW5 377 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 DCAF4L1Q3SXM0 396 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 LARP1BQ659C4 914 aaKnown RBP4.98□□□□□ -1.61
CKS1B-207ENST00000477676 NAIF1Q69YI7 327 aaPredicted RBP4.98□□□□□ -1.61
CKS1B-207ENST00000477676 KCNK18Q7Z418 384 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 KBTBD6Q86V97 674 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 DIS3L2Q8IYB7 885 aaKnown RBP4.98□□□□□ -1.61
CKS1B-207ENST00000477676 SPEM1Q8N4L4 309 aa4.98□□□□□ -1.61
CKS1B-207ENST00000477676 RCBTB1Q8NDN9 531 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms