RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CAPN1P07384 714 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 KRT3P12035 628 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 SLC26A3P40879 764 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 POLD2P49005 469 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 SLC26A2P50443 739 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 ZNF200P98182 395 aaPredicted RBP12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 STAT4Q14765 748 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 NFIL3Q16649 462 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 TTC27Q6P3X3 843 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 ZNF720Q7Z2F6 126 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 AKAP14Q86UN6 197 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 POU5F2Q8N7G0 328 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 GALNT11Q8NCW6 608 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 TP53INP1Q96A56 240 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 ZUFSPQ96AP4 578 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 DNAI2Q9GZS0 605 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 DNAJC17Q9NVM6 304 aaKnown RBP12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 ARHGAP26Q9UNA1 814 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 POLIQ9UNA4 740 aa12.98□□□□□ -0.33
RTFDC1-207ENST00000477573 YKT6O15498 198 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 CSPG5O95196 566 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 NR3C1P04150 777 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 MAPTP10636 758 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 YWHABP31946 246 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 SHEQ5VZ18 495 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 PAOXQ6QHF9 649 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 LBX2Q6XYB7 198 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 ZNF600Q6ZNG1 722 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 GADL1Q6ZQY3 521 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 NT5DC3Q86UY8 548 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 NDUFAF2Q8N183 169 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 CHCHD4Q8N4Q1 142 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 RFWD2Q8NHY2 731 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 GRPEL2Q8TAA5 225 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 REXO5Q96IC2 774 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 RBM15Q96T37 977 aaKnown RBP eCLIP12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 KCNN2Q9H2S1 579 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 GPBP1L1Q9HC44 474 aaPredicted RBP12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 PCDH12Q9NPG4 1184 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 ATP13A2Q9NQ11 1180 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 ANKEF1Q9NU02 776 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 TMEM9Q9P0T7 183 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 XPO7Q9UIA9 1087 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 ACAD8Q9UKU7 415 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 PCDHA10Q9Y5I2 948 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 PTPRFP10586 1907 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 NFASCO94856 1347 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 A0A087X0T9 212 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 A0A0G2JLL6 359 aaPredicted RBP12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 OR5K3A6NET4 321 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 CAPN14A8MX76 684 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 TRIM77I1YAP6 450 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 ATMINO43313 823 aaPredicted RBP12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 H6PDO95479 791 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 XRCC5P13010 732 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 NR4A1P22736 598 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 WEE1P30291 646 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 NMT1P30419 496 aaKnown RBP12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 EPHX2P34913 555 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 HADHAP40939 763 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 HAAOP46952 286 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 RARRES1P49788 294 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 TRIP13Q15645 432 aaPredicted RBP12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 ATAD3BQ5T9A4 648 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 PLEKHA7Q6IQ23 1121 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 PRRT2Q7Z6L0 340 aaPredicted RBP12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 IGFN1Q86VF2 1251 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 ZNF354CQ86Y25 554 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 SLC15A4Q8N697 577 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 SIMC1Q8NDZ2 872 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 ADCY4Q8NFM4 1077 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 SLC26A7Q8TE54 656 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 GLG1Q92896 1179 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 TMIGD2Q96BF3 282 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 CDCA5Q96FF9 252 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 DCUN1D5Q9BTE7 237 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 ELP3Q9H9T3 547 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 WASH6PQ9NQA3 447 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 EBF1Q9UH73 591 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 TAGLN3Q9UI15 199 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 AMFRQ9UKV5 643 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 NUP50Q9UKX7 468 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 POLHQ9Y253 713 aa12.97□□□□□ -0.33
RTFDC1-207ENST00000477573 ASTN1O14525 1302 aa12.96□□□□□ -0.33
RTFDC1-207ENST00000477573 FCHO1O14526 889 aa12.96□□□□□ -0.33
RTFDC1-207ENST00000477573 NKRFO15226 690 aaKnown RBP eCLIP12.96□□□□□ -0.33
RTFDC1-207ENST00000477573 ACSL4O60488 711 aa12.96□□□□□ -0.33
RTFDC1-207ENST00000477573 TLR2O60603 784 aa12.96□□□□□ -0.33
RTFDC1-207ENST00000477573 ACSL3O95573 720 aa12.96□□□□□ -0.33
RTFDC1-207ENST00000477573 PAHP00439 452 aa12.96□□□□□ -0.33
RTFDC1-207ENST00000477573 COL6A1P12109 1028 aa12.96□□□□□ -0.33
RTFDC1-207ENST00000477573 ITIH1P19827 911 aa12.96□□□□□ -0.33
RTFDC1-207ENST00000477573 POLR2BP30876 1174 aaKnown RBP12.96□□□□□ -0.33
RTFDC1-207ENST00000477573 RRM2P31350 389 aa12.96□□□□□ -0.33
RTFDC1-207ENST00000477573 AP2S1P53680 142 aaPredicted RBP12.96□□□□□ -0.33
RTFDC1-207ENST00000477573 STXBP2Q15833 593 aa12.96□□□□□ -0.33
RTFDC1-207ENST00000477573 TREML2Q5T2D2 321 aa12.96□□□□□ -0.33
RTFDC1-207ENST00000477573 XKR5Q6UX68 686 aa12.96□□□□□ -0.33
RTFDC1-207ENST00000477573 OTOP3Q7RTS5 596 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms