RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 MFAP3LO75121 409 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 APOEP02649 317 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 PTMAP06454 111 aaKnown RBP18.26■□□□□ 0.51
PTPN7-209ENST00000477554 PABPC1P11940 636 aaKnown RBP18.26■□□□□ 0.51
PTPN7-209ENST00000477554 MMP8P22894 467 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 CNR2P34972 360 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 NOS2P35228 1153 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 SULT1E1P49888 294 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 ENPP2Q13822 863 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 MAP7D1Q3KQU3 841 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 HSF5Q4G112 596 aaPredicted RBP18.26■□□□□ 0.51
PTPN7-209ENST00000477554 IRF2BP2Q7Z5L9 587 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 PGBD3Q8N328 593 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.26■□□□□ 0.51
PTPN7-209ENST00000477554 OR8K1Q8NGG5 319 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 CCDC26Q8TAB7 109 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 NT5C3BQ969T7 300 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 SYT11Q9BT88 431 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 MKRN2Q9H000 416 aaKnown RBP18.26■□□□□ 0.51
PTPN7-209ENST00000477554 ARRDC1-AS1Q9H2J1 176 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.26■□□□□ 0.51
PTPN7-209ENST00000477554 BCCIPQ9P287 314 aaKnown RBP eCLIP18.26■□□□□ 0.51
PTPN7-209ENST00000477554 HS3ST4Q9Y661 456 aa18.26■□□□□ 0.51
PTPN7-209ENST00000477554 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.26■□□□□ 0.51
PTPN7-209ENST00000477554 LRRC53A6NM62 1247 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 PAGE1O75459 146 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 P2RY2P41231 377 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 ADKP55263 362 aaKnown RBP18.25■□□□□ 0.51
PTPN7-209ENST00000477554 CLEC16AQ2KHT3 1053 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 C15orf59Q2T9L4 293 aaPredicted RBP18.25■□□□□ 0.51
PTPN7-209ENST00000477554 PREPLQ4J6C6 727 aaPredicted RBP18.25■□□□□ 0.51
PTPN7-209ENST00000477554 MBLAC2Q68D91 279 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 TCEAL6Q6IPX3 200 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 FBXL22Q6P050 247 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 MFN1Q8IWA4 741 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 APCDD1Q8J025 514 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 HJURPQ8NCD3 748 aaPredicted RBP18.25■□□□□ 0.51
PTPN7-209ENST00000477554 KCNV2Q8TDN2 545 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 SYN2Q92777 582 aaPredicted RBP18.25■□□□□ 0.51
PTPN7-209ENST00000477554 TCEAL3Q969E4 200 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 MYO19Q96H55 970 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 BTN2A3PQ96KV6 586 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 SLC2A11Q9BYW1 496 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 POLMQ9NP87 494 aaPredicted RBP18.25■□□□□ 0.51
PTPN7-209ENST00000477554 RAB23Q9ULC3 237 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 TNRC6BQ9UPQ9 1833 aaKnown RBP18.25■□□□□ 0.51
PTPN7-209ENST00000477554 PLXND1Q9Y4D7 1925 aa18.25■□□□□ 0.51
PTPN7-209ENST00000477554 GDF9O60383 454 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 CCDC172P0C7W6 258 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 GBP1P32455 592 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 ARID5BQ14865 1188 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 SF3A2Q15428 464 aaKnown RBP18.24■□□□□ 0.51
PTPN7-209ENST00000477554 ARMCX6Q7L4S7 300 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 BNIPLQ7Z465 357 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 ZNF677Q86XU0 584 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 TC2NQ8N9U0 490 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 RNF34Q969K3 372 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 ZC3H10Q96K80 434 aaKnown RBP18.24■□□□□ 0.51
PTPN7-209ENST00000477554 MRGPRX1Q96LB2 322 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 DNAJC7Q99615 494 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 AGPAT1Q99943 283 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 TRIM62Q9BVG3 475 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 ABHD10Q9NUJ1 306 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.24■□□□□ 0.51
PTPN7-209ENST00000477554 ZNHIT6Q9NWK9 470 aaKnown RBP18.24■□□□□ 0.51
PTPN7-209ENST00000477554 GMEB2Q9UKD1 530 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 VANGL2Q9ULK5 521 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 NUP205Q92621 2012 aa18.24■□□□□ 0.51
PTPN7-209ENST00000477554 CEP192Q8TEP8 1941 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 CNTN5O94779 1100 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 LUC7L3O95232 432 aaKnown RBP18.23■□□□□ 0.51
PTPN7-209ENST00000477554 RETP07949 1114 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 MZF1P28698 734 aaPredicted RBP18.23■□□□□ 0.51
PTPN7-209ENST00000477554 CCR1P32246 355 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 PTGER3P43115 390 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 CXCR3P49682 368 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 COPAP53621 1224 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 ATP11AP98196 1134 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 AUHQ13825 339 aaKnown RBP18.23■□□□□ 0.51
PTPN7-209ENST00000477554 MPP7Q5T2T1 576 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 SFMBT2Q5VUG0 894 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 NUDT18Q6ZVK8 323 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 TRMT11Q7Z4G4 463 aaKnown RBP18.23■□□□□ 0.51
PTPN7-209ENST00000477554 ZDHHC17Q8IUH5 632 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 TMEFF1Q8IYR6 380 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 ZNF683Q8IZ20 524 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 FIBINQ8TAL6 211 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 RMDN1Q96DB5 314 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 PANX2Q96RD6 677 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 TKTL2Q9H0I9 626 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 SIK2Q9H0K1 926 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 TMEM245Q9H330 911 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 SEMA4GQ9NTN9 838 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 SEPT11Q9NVA2 429 aaKnown RBP18.23■□□□□ 0.51
PTPN7-209ENST00000477554 ARHGEF38Q9NXL2 777 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 AIPL1Q9NZN9 384 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 USP18Q9UMW8 372 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 CYP8B1Q9UNU6 501 aa18.23■□□□□ 0.51
PTPN7-209ENST00000477554 CEP250Q9BV73 2442 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms