RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 TUBA4AP68366 448 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 CLDN10P78369 228 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 ATP1A4Q13733 1029 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 MAP7D1Q3KQU3 841 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 SPDYE2Q495Y8 402 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 EPGNQ6UW88 154 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 DCDC5Q6ZRR9 648 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 C14orf80Q86SX3 495 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 GPR180Q86V85 440 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 WDTC1Q8N5D0 677 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 ZNF781Q8N8C0 355 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 LRRC39Q96DD0 335 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 PGBD4Q96DM1 585 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 OR52B2Q96RD2 323 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 EBNA1BP2Q99848 306 aaKnown RBP13.76□□□□□ -0.21
DFFB-209ENST00000477548 ARMC7Q9H6L4 198 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 AGO4Q9HCK5 861 aaKnown RBP13.76□□□□□ -0.21
DFFB-209ENST00000477548 TCF7L2Q9NQB0 619 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 RBAKQ9NYW8 714 aaPredicted RBP13.76□□□□□ -0.21
DFFB-209ENST00000477548 SLC17A6Q9P2U8 582 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 COPG2Q9UBF2 871 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 CNOT11Q9UKZ1 510 aaKnown RBP13.76□□□□□ -0.21
DFFB-209ENST00000477548 TMED5Q9Y3A6 229 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 NR2E3Q9Y5X4 410 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 TCP10L2B9ZVM9 353 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 NEMP1O14524 444 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 CSPG5O95196 566 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 ZBTB11O95625 1053 aaPredicted RBP13.76□□□□□ -0.21
DFFB-209ENST00000477548 ALDOAP04075 364 aaKnown RBP13.76□□□□□ -0.21
DFFB-209ENST00000477548 P4HA1P13674 534 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 MIPP30301 263 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 HARS2P49590 506 aaKnown RBP13.76□□□□□ -0.21
DFFB-209ENST00000477548 CDH6P55285 790 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 PSMC1P62191 440 aaKnown RBP13.76□□□□□ -0.21
DFFB-209ENST00000477548 TRPC3Q13507 836 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 ART3Q13508 389 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 RWDD4Q6NW29 188 aaKnown RBP13.76□□□□□ -0.21
DFFB-209ENST00000477548 SAMD3Q8N6K7 520 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 IL31RAQ8NI17 732 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 ACMSDQ8TDX5 336 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 CDH19Q9H159 772 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 IRF2BPLQ9H1B7 796 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 TRPV6Q9H1D0 765 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 CLK4Q9HAZ1 481 aaKnown RBP13.76□□□□□ -0.21
DFFB-209ENST00000477548 TJP2Q9UDY2 1190 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 AGO2Q9UKV8 859 aaKnown RBP13.76□□□□□ -0.21
DFFB-209ENST00000477548 TRIM17Q9Y577 477 aa13.76□□□□□ -0.21
DFFB-209ENST00000477548 STX16-NPEPL1H3BU86 382 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 GIPC1O14908 333 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 ADAM23O75077 832 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 MAP3K6O95382 1288 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 POLR2BP30876 1174 aaKnown RBP13.75□□□□□ -0.21
DFFB-209ENST00000477548 MTMR1Q13613 665 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 PRKG1Q13976 671 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 ZNF829Q3KNS6 432 aaPredicted RBP13.75□□□□□ -0.21
DFFB-209ENST00000477548 TKFCQ3LXA3 575 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 IL23RQ5VWK5 629 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 OGFOD2Q6N063 350 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 CARM1Q86X55 608 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 UNC5BQ8IZJ1 945 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 CENPSQ8N2Z9 138 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 RNF169Q8NCN4 708 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 PLEKHA8Q96JA3 519 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 CEP170P1Q96L14 293 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 PPP1R10Q96QC0 940 aaKnown RBP13.75□□□□□ -0.21
DFFB-209ENST00000477548 GPATCH1Q9BRR8 931 aaKnown RBP13.75□□□□□ -0.21
DFFB-209ENST00000477548 ZNF518BQ9C0D4 1074 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 WDR41Q9HAD4 459 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 OLAHQ9NV23 265 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 TRNAU1APQ9NX07 287 aaKnown RBP13.75□□□□□ -0.21
DFFB-209ENST00000477548 K7EPI3 171 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 BCAS2O75934 225 aaPredicted RBP13.75□□□□□ -0.21
DFFB-209ENST00000477548 ALDH2P05091 517 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 MX2P20592 715 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 RBL1P28749 1068 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 ZNF132P52740 706 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 PRAMEP78395 509 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 SMAD1Q15797 465 aaKnown RBP13.75□□□□□ -0.21
DFFB-209ENST00000477548 SMUG1Q53HV7 270 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 METTL21CQ5VZV1 264 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 CASC4Q6P4E1 433 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 FAM156AQ8NDB6 213 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 CMASQ8NFW8 434 aaPredicted RBP13.75□□□□□ -0.21
DFFB-209ENST00000477548 MAPK15Q8TD08 544 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 LRRN4Q8WUT4 740 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 ATP6V1E2Q96A05 226 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 ZNF597Q96LX8 424 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 NTPCRQ9BSD7 190 aaKnown RBP13.75□□□□□ -0.21
DFFB-209ENST00000477548 SDCBP2Q9H190 292 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 XPNPEP3Q9NQH7 507 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 ANKEF1Q9NU02 776 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 TMEM216Q9P0N5 145 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 RGS17Q9UGC6 210 aaPredicted RBP13.75□□□□□ -0.21
DFFB-209ENST00000477548 FBXO9Q9UK97 447 aaPredicted RBP13.75□□□□□ -0.21
DFFB-209ENST00000477548 PCDHA11Q9Y5I1 949 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 ZNF541Q9H0D2 1346 aa13.75□□□□□ -0.21
DFFB-209ENST00000477548 FUCA1P04066 466 aa13.74□□□□□ -0.21
DFFB-209ENST00000477548 MCF2P10911 925 aa13.74□□□□□ -0.21
DFFB-209ENST00000477548 SLC10A2Q12908 348 aaPredicted RBP13.74□□□□□ -0.21
DFFB-209ENST00000477548 DPYSQ14117 519 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms