RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 TCF7L2Q9NQB0 619 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 HACD3Q9P035 362 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 PTCH2Q9Y6C5 1203 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 C5orf60A6NFR6 353 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 H0YGN5 161 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 SUPT7LO94864 414 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 BST1Q10588 318 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 ANKRD22Q5VYY1 191 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 CDCA2Q69YH5 1023 aaPredicted RBP14.97□□□□□ -0.01
HDAC6-220ENST00000477528 C16orf46Q6P387 395 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 ARCQ7LC44 396 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 STK32AQ8WU08 396 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 TBL1YQ9BQ87 522 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 MMADHCQ9H3L0 296 aaPredicted RBP14.97□□□□□ -0.01
HDAC6-220ENST00000477528 KANSL3Q9P2N6 904 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 NFS1Q9Y697 457 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 LTBP3Q9NS15 1303 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 KIF1CO43896 1103 aaKnown RBP14.97□□□□□ -0.01
HDAC6-220ENST00000477528 SKAP2O75563 359 aaPredicted RBP14.97□□□□□ -0.01
HDAC6-220ENST00000477528 TPSB2P20231 275 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 FKBP1BP68106 108 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 TPSAB1Q15661 275 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 EFL1Q7Z2Z2 1120 aaKnown RBP14.97□□□□□ -0.01
HDAC6-220ENST00000477528 MCRS1Q96EZ8 462 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 CSPG4P5Q96PW8 444 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 SSU72Q9NP77 194 aaKnown RBP14.97□□□□□ -0.01
HDAC6-220ENST00000477528 ABCC13Q9NSE7 274 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 LSM7Q9UK45 103 aaKnown RBP14.97□□□□□ -0.01
HDAC6-220ENST00000477528 ADAM28Q9UKQ2 775 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 MYH15Q9Y2K3 1946 aa14.97□□□□□ -0.01
HDAC6-220ENST00000477528 SLC12A8A0AV02 714 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 PTPN9P43378 593 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 AIF1P55008 147 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 TBX4P57082 545 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 DSG1Q02413 1049 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 FAM110CQ1W6H9 321 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 PIWIL2Q8TC59 973 aaKnown RBP14.96□□□□□ -0.01
HDAC6-220ENST00000477528 LRRN4Q8WUT4 740 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 SEC14L1Q92503 715 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 TRIM54Q9BYV2 358 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 GPAMQ9HCL2 828 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 CNGB3Q9NQW8 809 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 FAF1Q9UNN5 650 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-220ENST00000477528 IPPQ9Y573 584 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 PCDHB5Q9Y5E4 795 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 FAM237BA0A1B0GVD1 139 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 ERCC2P18074 760 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 CRABP2P29373 138 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 IL1RL1Q01638 556 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 CCDC15Q0P6D6 951 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 CYLC2Q14093 348 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-220ENST00000477528 ANKRD23Q86SG2 305 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 SLC35B2Q8TB61 432 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 JADE3Q92613 823 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 FGD4Q96M96 766 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 APBA2Q99767 749 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 NMRAL1Q9HBL8 299 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 SLC17A7Q9P2U7 560 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 TSR3Q9UJK0 312 aaKnown RBP14.96□□□□□ -0.01
HDAC6-220ENST00000477528 SORCS3Q9UPU3 1222 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 BIRC5O15392 142 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 CSPG5O95196 566 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 VAPBO95292 243 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 EEF1B2P24534 225 aaKnown RBP14.96□□□□□ -0.01
HDAC6-220ENST00000477528 PTPN7P35236 360 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 ILDR2Q71H61 639 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 TAS1R3Q7RTX0 852 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 NLGN2Q8NFZ4 835 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 OSBPL7Q9BZF2 842 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 TRPC7Q9HCX4 862 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 RAD54BQ9Y620 910 aa14.96□□□□□ -0.01
HDAC6-220ENST00000477528 SCN7AQ01118 1682 aa14.96□□□□□ -0.02
HDAC6-220ENST00000477528 FGF10O15520 208 aaPredicted RBP14.96□□□□□ -0.02
HDAC6-220ENST00000477528 RPL9P32969 192 aaKnown RBP14.96□□□□□ -0.02
HDAC6-220ENST00000477528 TWF1Q12792 350 aa14.96□□□□□ -0.02
HDAC6-220ENST00000477528 CSHL1Q14406 222 aa14.96□□□□□ -0.02
HDAC6-220ENST00000477528 SLC1A5Q15758 541 aa14.96□□□□□ -0.02
HDAC6-220ENST00000477528 PIGWQ7Z7B1 504 aa14.96□□□□□ -0.02
HDAC6-220ENST00000477528 NCLNQ969V3 563 aa14.96□□□□□ -0.02
HDAC6-220ENST00000477528 CCDC138Q96M89 665 aa14.96□□□□□ -0.02
HDAC6-220ENST00000477528 TBC1D10AQ9BXI6 508 aa14.96□□□□□ -0.02
HDAC6-220ENST00000477528 CYLDQ9NQC7 956 aa14.96□□□□□ -0.02
HDAC6-220ENST00000477528 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-220ENST00000477528 FOXO6A8MYZ6 492 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 BTBD19C9JJ37 291 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 GPD2P43304 727 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 ZNF177Q13360 481 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-220ENST00000477528 CRYMQ14894 314 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 BNC2Q6ZN30 1099 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-220ENST00000477528 UNC5AQ6ZN44 842 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 AGAP11Q8TF27 550 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 EME1Q96AY2 570 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 SDCBP2Q9H190 292 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 COL22A1Q8NFW1 1626 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-220ENST00000477528 MYH10P35580 1976 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 C2orf81A6NN90 581 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 CLDN5O00501 218 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 ARIH2O95376 493 aa14.95□□□□□ -0.02
HDAC6-220ENST00000477528 TCN1P20061 433 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-220ENST00000477528 HMOX2P30519 316 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms