RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 ACAP1Q15027 740 aa17.43■□□□□ 0.38
EPHB4-204ENST00000477446 BRMS1LQ5PSV4 323 aa17.43■□□□□ 0.38
EPHB4-204ENST00000477446 DAB2IPQ5VWQ8 1189 aa17.43■□□□□ 0.38
EPHB4-204ENST00000477446 NIPA2Q8N8Q9 360 aa17.43■□□□□ 0.38
EPHB4-204ENST00000477446 OSCP1Q8WVF1 389 aa17.43■□□□□ 0.38
EPHB4-204ENST00000477446 NECAB3Q96P71 396 aaPredicted RBP17.43■□□□□ 0.38
EPHB4-204ENST00000477446 RUFY1Q96T51 708 aa17.43■□□□□ 0.38
EPHB4-204ENST00000477446 FAM83CQ9BQN1 747 aa17.43■□□□□ 0.38
EPHB4-204ENST00000477446 TKTL2Q9H0I9 626 aa17.43■□□□□ 0.38
EPHB4-204ENST00000477446 CD320Q9NPF0 282 aa17.43■□□□□ 0.38
EPHB4-204ENST00000477446 ANLNQ9NQW6 1124 aa17.43■□□□□ 0.38
EPHB4-204ENST00000477446 ARHGEF38Q9NXL2 777 aa17.43■□□□□ 0.38
EPHB4-204ENST00000477446 TBC1D14Q9P2M4 693 aa17.43■□□□□ 0.38
EPHB4-204ENST00000477446 AMACRQ9UHK6 382 aa17.43■□□□□ 0.38
EPHB4-204ENST00000477446 XPO7Q9UIA9 1087 aaKnown RBP17.43■□□□□ 0.38
EPHB4-204ENST00000477446 ZNF510Q9Y2H8 683 aa17.43■□□□□ 0.38
EPHB4-204ENST00000477446 I6L893 689 aaPredicted RBP17.42■□□□□ 0.38
EPHB4-204ENST00000477446 SLC9A3R1O14745 358 aaPredicted RBP17.42■□□□□ 0.38
EPHB4-204ENST00000477446 CHADO15335 359 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 PROSCO94903 275 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 MAN1A1P33908 653 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 TDGQ13569 410 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 CYP1B1Q16678 543 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 TRIM68Q6AZZ1 485 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 SCYL2Q6P3W7 929 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 SLC13A5Q86YT5 568 aaPredicted RBP17.42■□□□□ 0.38
EPHB4-204ENST00000477446 RNF135Q8IUD6 432 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 GJD3Q8N144 294 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 ATP6V0D2Q8N8Y2 350 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 KRT35Q92764 455 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 AZIN2Q96A70 460 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 BTN2A3PQ96KV6 586 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 TMPRSS4Q9NRS4 437 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 PCYOX1Q9UHG3 505 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 SLC12A6Q9UHW9 1150 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 STOML2Q9UJZ1 356 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 ADAM21Q9UKJ8 722 aa17.42■□□□□ 0.38
EPHB4-204ENST00000477446 ACSL4O60488 711 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 LRCH4O75427 683 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 LATS1O95835 1130 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 GGCXP38435 758 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 HSPA9P38646 679 aaKnown RBP17.41■□□□□ 0.38
EPHB4-204ENST00000477446 IFNAR2P48551 515 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 SLC11A2P49281 568 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 DR1Q01658 176 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 HLTFQ14527 1009 aaKnown RBP eCLIP17.41■□□□□ 0.38
EPHB4-204ENST00000477446 EML3Q32P44 896 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 CFAP58Q5T655 872 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 CPNE8Q86YQ8 564 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 ADGRG2Q8IZP9 1017 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 CCDC185Q8N715 623 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 OTUB2Q96DC9 234 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 SH3GL2Q99962 352 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 HINFPQ9BQA5 517 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 FAM129AQ9BZQ8 928 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 VPS18Q9P253 973 aa17.41■□□□□ 0.38
EPHB4-204ENST00000477446 GOLGA6L7A0A1B0GV03 622 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 AGPSO00116 658 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 NARSO43776 548 aaKnown RBP17.4■□□□□ 0.38
EPHB4-204ENST00000477446 PYGMP11217 842 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 MIPP30301 263 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 ADRA1BP35368 520 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 TNK2Q07912 1038 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 ZNF211Q13398 564 aaPredicted RBP17.4■□□□□ 0.38
EPHB4-204ENST00000477446 PDGFRLQ15198 375 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 SPDYCQ5MJ68 293 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 ADGRF1Q5T601 910 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 NADSYN1Q6IA69 706 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 FAM217AQ8IXS0 508 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 IQCKQ8N0W5 287 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 GDAP1L1Q96MZ0 367 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 ERP44Q9BS26 406 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 EBF3Q9H4W6 596 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 BRD9Q9H8M2 597 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 HOMER3Q9NSC5 361 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 PCSK1NQ9UHG2 260 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 MYOFQ9NZM1 2061 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 TICRRQ7Z2Z1 1910 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 VCANP13611 3396 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 ARNTLO00327 626 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 TTI1O43156 1089 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 PSTPIP1O43586 416 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 RNF40O75150 1001 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 PAGE1O75459 146 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 ARSAP15289 507 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 TCF4P15884 667 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 PCK1P35558 622 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 FNTAP49354 379 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 ARL13BQ3SXY8 428 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 FAM133BQ5BKY9 247 aaKnown RBP17.4■□□□□ 0.38
EPHB4-204ENST00000477446 PIK3R6Q5UE93 754 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 C12orf50Q8NA57 414 aaPredicted RBP17.4■□□□□ 0.38
EPHB4-204ENST00000477446 IRF7Q92985 503 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 ATP2A3Q93084 1043 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 MAGOHBQ96A72 148 aaKnown RBP17.4■□□□□ 0.38
EPHB4-204ENST00000477446 PEBP4Q96S96 227 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 NCAPGQ9BPX3 1015 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 HPS4Q9NQG7 708 aa17.4■□□□□ 0.38
EPHB4-204ENST00000477446 FEZ2Q9UHY8 353 aaPredicted RBP17.4■□□□□ 0.38
EPHB4-204ENST00000477446 USP18Q9UMW8 372 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms