RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ZDHHC11BP0C7U3 371 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 IRF1P10914 325 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 BCKDHBP21953 392 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 DGKGP49619 791 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 MAP3K7CLP57077 242 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 ZNF33AQ06730 810 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 SETDB1Q15047 1291 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 NAIF1Q69YI7 327 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-214ENST00000477152 SCARA5Q6ZMJ2 495 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 WFDC8Q8IUA0 241 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 BBS7Q8IWZ6 715 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 ZNF276Q8N554 614 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 KCNK16Q96T55 309 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 GTPBP2Q9BX10 602 aaKnown RBP7.62□□□□□ -1.19
BRCA1-214ENST00000477152 NRSN2Q9GZP1 204 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 XYLT2Q9H1B5 865 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 MIR1-1HGQ9H1L0 117 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 BLZF1Q9H2G9 400 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 SMYD3Q9H7B4 428 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 GMIPQ9P107 970 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 PILRBQ9UKJ0 227 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 TNRC6BQ9UPQ9 1833 aaKnown RBP7.62□□□□□ -1.19
BRCA1-214ENST00000477152 ABCA7Q8IZY2 2146 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 NCOR2Q9Y618 2525 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 FAM221AA4D161 298 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 LRRIQ3A6PVS8 624 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-214ENST00000477152 CDX4O14627 284 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-214ENST00000477152 TIMM44O43615 452 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 CACNG3O60359 315 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 C4BPAP04003 597 aaKnown RBP7.62□□□□□ -1.19
BRCA1-214ENST00000477152 NR3C1P04150 777 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 ZSCAN22P10073 491 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-214ENST00000477152 ACADMP11310 421 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 TYRP14679 529 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 HOXD13P35453 343 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 NDST1P52848 882 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 CDH8P55286 799 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 ZNF445P59923 1031 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 YWHAEP62258 255 aaKnown RBP7.62□□□□□ -1.19
BRCA1-214ENST00000477152 RPS26P62854 115 aaKnown RBP7.62□□□□□ -1.19
BRCA1-214ENST00000477152 ZXDBP98169 803 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 CCDC142Q17RM4 750 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 GAB4Q2WGN9 574 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 ZACNQ401N2 412 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 C10orf120Q5SQS8 335 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 RESP18Q5W5W9 173 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 SHC4Q6S5L8 630 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 IL27RAQ6UWB1 636 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 CCDC81Q6ZN84 652 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 ARMCX6Q7L4S7 300 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 ZNF557Q8N988 423 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-214ENST00000477152 SCAMP5Q8TAC9 235 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 SLC2A14Q8TDB8 520 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 IPO4Q8TEX9 1081 aaKnown RBP7.62□□□□□ -1.19
BRCA1-214ENST00000477152 RLN3Q8WXF3 142 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 UBXN4Q92575 508 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 SNX21Q969T3 373 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 CYFIP2Q96F07 1278 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 WDR89Q96FK6 387 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-214ENST00000477152 HNRNPABQ99729 332 aaKnown RBP7.62□□□□□ -1.19
BRCA1-214ENST00000477152 POLR3BQ9NW08 1133 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-214ENST00000477152 PPT2Q9UMR5 302 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 ATP6V1DQ9Y5K8 247 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 DEAF1O75398 565 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-214ENST00000477152 DLGAP3O95886 979 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 ASS1P00966 412 aaKnown RBP7.61□□□□□ -1.19
BRCA1-214ENST00000477152 RARGP13631 454 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 NID1P14543 1247 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 HNRNPLP14866 589 aaKnown RBP eCLIP7.61□□□□□ -1.19
BRCA1-214ENST00000477152 ACO1P21399 889 aaKnown RBP7.61□□□□□ -1.19
BRCA1-214ENST00000477152 MAOBP27338 520 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 ADORA2BP29275 332 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 GTF2H1P32780 548 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 PI4KAP42356 2102 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 VAMP7P51809 220 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 C19orf57Q0VDD7 668 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 EIF4HQ15056 248 aaKnown RBP7.61□□□□□ -1.19
BRCA1-214ENST00000477152 LCE2AQ5TA79 106 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-214ENST00000477152 EMC10Q5UCC4 262 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 C12orf40Q86WS4 652 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 TMEM25Q86YD3 366 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 FUKQ8N0W3 1084 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 DEFB124Q8NES8 71 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 FAM84AQ96KN4 292 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 GABRG3Q99928 467 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 SLC2A11Q9BYW1 496 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 GTPBP4Q9BZE4 634 aaKnown RBP7.61□□□□□ -1.19
BRCA1-214ENST00000477152 UBXN6Q9BZV1 441 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 OLA1Q9NTK5 396 aaKnown RBP7.61□□□□□ -1.19
BRCA1-214ENST00000477152 KCNK4Q9NYG8 393 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 CLIC5Q9NZA1 410 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 CALCOCO1Q9P1Z2 691 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 PCDHA7Q9UN72 937 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 APOBEC2Q9Y235 224 aaKnown RBP7.61□□□□□ -1.19
BRCA1-214ENST00000477152 NFE2L3Q9Y4A8 694 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 MYO18AQ92614 2054 aaKnown RBP7.61□□□□□ -1.19
BRCA1-214ENST00000477152 DCHS1Q96JQ0 3298 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 WDR87Q6ZQQ6 2873 aa7.61□□□□□ -1.19
BRCA1-214ENST00000477152 MEI4A8MW99 385 aa7.6□□□□□ -1.19
BRCA1-214ENST00000477152 PATE3B3GLJ2 98 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms