RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 FZD9O00144 591 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 PGRMC1O00264 195 aaKnown RBP6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 SMAD9O15198 467 aaKnown RBP6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 BUB1O43683 1085 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 SGPL1O95470 568 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 GGPS1O95749 300 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 ASLP04424 464 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 UMPSP11172 480 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 PRKCAP17252 672 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 RXRBP28702 533 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 CDC25AP30304 524 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 CLCNKAP51800 687 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 ARFIP2P53365 341 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 ATXN3P54252 364 aaPredicted RBP6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 CYP24A1Q07973 514 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 LSAMPQ13449 338 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 ARHGAP44Q17R89 818 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 FNDC3BQ53EP0 1204 aaKnown RBP6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 C10orf120Q5SQS8 335 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 ZNF385CQ66K41 422 aaPredicted RBP6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 GTF2IRD2BQ6EKJ0 949 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 PSRC1Q6PGN9 363 aaPredicted RBP6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 RTL4Q6ZR62 310 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 PTCHD4Q6ZW05 846 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 GTF2IRD2Q86UP8 949 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 SLC51AQ86UW1 340 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 GPR65Q8IYL9 337 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 ZNF295-AS1Q8N0V1 137 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 KLHL36Q8N4N3 616 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 ZNF461Q8TAF7 563 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 AGAP11Q8TF27 550 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 ATP8B4Q8TF62 1192 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 ZNF384Q8TF68 577 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 XAGE3Q8WTP9 111 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 C7orf43Q8WVR3 580 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 HTRA1Q92743 480 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 WNT8BQ93098 351 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 HAUS1Q96CS2 278 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 FAM227BQ96M60 508 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 SLC9A7Q96T83 725 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 KCNN2Q9H2S1 579 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 LIMA1Q9UHB6 759 aaKnown RBP6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 ERVK-11Q9UQG0 969 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 ZHX2Q9Y6X8 837 aa6.13□□□□□ -1.43
SPTLC3-205ENST00000476791 LOC100506127A0A0U1RQW1 187 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 KIAA0391O15091 583 aaKnown RBP6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 CLOCKO15516 846 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 EXOC3O60645 756 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 MAFKO60675 156 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 CRTAPO75718 401 aaPredicted RBP6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 SLURP2P0DP57 97 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 HK1P19367 917 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 SLC9A3P48764 834 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 ACADVLP49748 655 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 RGS19P49795 217 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 ASIC1P78348 528 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 PMP22Q01453 160 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 ELP6Q0PNE2 266 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 LMAN2Q12907 356 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 DNAJC3Q13217 504 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 RASGRF1Q13972 1273 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 POLD3Q15054 466 aaPredicted RBP6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 PCBP1Q15365 356 aaKnown RBP eCLIP6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 TBRG1Q3YBR2 411 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 ARSJQ5FYB0 599 aaPredicted RBP6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 HERC4Q5GLZ8 1057 aaPredicted RBP6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 EFHC2Q5JST6 749 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 TMEM31Q5JXX7 168 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 PKN3Q6P5Z2 889 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 TRAT1Q6PIZ9 186 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 CHERPQ8IWX8 916 aaKnown RBP6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 MB21D2Q8IYB1 491 aaPredicted RBP6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 C11orf65Q8NCR3 313 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 RDM1Q8NG50 284 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 SCFD1Q8WVM8 642 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 ACSF2Q96CM8 615 aaPredicted RBP6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 SEC16BQ96JE7 1060 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 CSRNP1Q96S65 589 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 SH3GL2Q99962 352 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 WDR26Q9H7D7 661 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 MBIPQ9NS73 344 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 ZDHHC18Q9NUE0 388 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 TDP1Q9NUW8 608 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 ZSCAN32Q9NX65 697 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 MARK1Q9P0L2 795 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 TSPYL4Q9UJ04 414 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 FOXD3Q9UJU5 478 aaPredicted RBP6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 RCAN3Q9UKA8 241 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 DNMBPQ6XZF7 1577 aa6.12□□□□□ -1.43
SPTLC3-205ENST00000476791 A0A087X0M5 115 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 A0A0A6YYJ9 748 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 A0A1B0GX30 115 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 ZNF98A6NK75 572 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 SLCO1B7G3V0H7 640 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 NDUFS8O00217 210 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 NUPL2O15504 423 aaKnown RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 SRGAP3O43295 1099 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 CACNG3O60359 315 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 NOBOXO60393 691 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 INHBAP08476 426 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms