RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 RNF125Q96EQ8 232 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 FUZQ9BT04 418 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 HTATIP2Q9BUP3 242 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 HDHD5Q9BXW7 423 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 TAOK3Q9H2K8 898 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 SYNPO2LQ9H987 977 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 THAP1Q9NVV9 213 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 POLR2AP24928 1970 aaKnown RBP6.58□□□□□ -1.36
VPS50-212ENST00000476413 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.58□□□□□ -1.36
VPS50-212ENST00000476413 H7C1Q1 480 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 ORC4O43929 436 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 BAIAP3O94812 1187 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 HNRNPCP07910 306 aaKnown RBP eCLIP6.58□□□□□ -1.36
VPS50-212ENST00000476413 IFIT1P09914 478 aaKnown RBP6.58□□□□□ -1.36
VPS50-212ENST00000476413 MVDP53602 400 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 CASP6P55212 293 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 SLC14A1Q13336 389 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 KCNB1Q14721 858 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 AWAT1Q58HT5 328 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 TSTD2Q5T7W7 516 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 TRIM72Q6ZMU5 477 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 LRRC8DQ7L1W4 858 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 RTL10Q7L3V2 364 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.58□□□□□ -1.36
VPS50-212ENST00000476413 Q8N1X5 172 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 SRFBP1Q8NEF9 429 aaKnown RBP6.58□□□□□ -1.36
VPS50-212ENST00000476413 HDAC2Q92769 488 aaKnown RBP6.58□□□□□ -1.36
VPS50-212ENST00000476413 ATP2A3Q93084 1043 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 RNFT2Q96EX2 444 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 TIMP4Q99727 224 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 CLSTN3Q9BQT9 956 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 ASNSD1Q9NWL6 643 aa6.58□□□□□ -1.36
VPS50-212ENST00000476413 FBXO9Q9UK97 447 aaPredicted RBP6.58□□□□□ -1.36
VPS50-212ENST00000476413 ITIH6Q6UXX5 1313 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 C17orf100A8MU93 164 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 CNTN5O94779 1100 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 ALDOCP09972 364 aaKnown RBP6.57□□□□□ -1.36
VPS50-212ENST00000476413 TNFRSF1AP19438 455 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 MCM7P33993 719 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 IDUAP35475 653 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 PGM1P36871 562 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 EIF5P55010 431 aaKnown RBP6.57□□□□□ -1.36
VPS50-212ENST00000476413 ERCC6LQ2NKX8 1250 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 WDR78Q5VTH9 848 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 CEP85Q6P2H3 762 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 MTFR2Q6P444 385 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 DSTYKQ6XUX3 929 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 H1FNTQ75WM6 255 aaPredicted RBP6.57□□□□□ -1.36
VPS50-212ENST00000476413 RFX6Q8HWS3 928 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 SCN4BQ8IWT1 228 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 ENDOVQ8N8Q3 282 aaKnown RBP6.57□□□□□ -1.36
VPS50-212ENST00000476413 ELP4Q96EB1 424 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 DAZAP1Q96EP5 407 aaKnown RBP6.57□□□□□ -1.36
VPS50-212ENST00000476413 HIC2Q96JB3 615 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 CTDSP1Q9GZU7 261 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 SFXN1Q9H9B4 322 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 IL17RBQ9NRM6 502 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 HDAC6Q9UBN7 1215 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 KLQ9UEF7 1012 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 SERGEFQ9UGK8 458 aa6.57□□□□□ -1.36
VPS50-212ENST00000476413 SIRT4Q9Y6E7 314 aaPredicted RBP6.57□□□□□ -1.36
VPS50-212ENST00000476413 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.56□□□□□ -1.36
VPS50-212ENST00000476413 SH2D7A6NKC9 451 aaPredicted RBP6.56□□□□□ -1.36
VPS50-212ENST00000476413 ANP32CO43423 234 aa6.56□□□□□ -1.36
VPS50-212ENST00000476413 TNNT1P13805 278 aa6.56□□□□□ -1.36
VPS50-212ENST00000476413 WT1P19544 449 aaPredicted RBP6.56□□□□□ -1.36
VPS50-212ENST00000476413 PROZP22891 400 aa6.56□□□□□ -1.36
VPS50-212ENST00000476413 GGT5P36269 586 aa6.56□□□□□ -1.36
VPS50-212ENST00000476413 CASP2P42575 452 aa6.56□□□□□ -1.36
VPS50-212ENST00000476413 HOXA4Q00056 320 aaPredicted RBP6.56□□□□□ -1.36
VPS50-212ENST00000476413 TBL3Q12788 808 aaKnown RBP6.56□□□□□ -1.36
VPS50-212ENST00000476413 PUM1Q14671 1186 aaKnown RBP eCLIP6.56□□□□□ -1.36
VPS50-212ENST00000476413 TMEM63BQ5T3F8 832 aa6.56□□□□□ -1.36
VPS50-212ENST00000476413 GRASPQ7Z6J2 395 aaPredicted RBP6.56□□□□□ -1.36
VPS50-212ENST00000476413 TFAP2DQ7Z6R9 452 aa6.56□□□□□ -1.36
VPS50-212ENST00000476413 NEU4Q8WWR8 484 aaPredicted RBP6.56□□□□□ -1.36
VPS50-212ENST00000476413 KCNJ9Q92806 393 aa6.56□□□□□ -1.36
VPS50-212ENST00000476413 P2RY11Q96G91 374 aa6.56□□□□□ -1.36
VPS50-212ENST00000476413 APOPT1Q96IL0 206 aa6.56□□□□□ -1.36
VPS50-212ENST00000476413 HS6ST2Q96MM7 605 aa6.56□□□□□ -1.36
VPS50-212ENST00000476413 BLOC1S4Q9NUP1 217 aa6.56□□□□□ -1.36
VPS50-212ENST00000476413 TFCP2L1Q9NZI6 479 aa6.56□□□□□ -1.36
VPS50-212ENST00000476413 CNPY2Q9Y2B0 182 aa6.56□□□□□ -1.36
VPS50-212ENST00000476413 PRSS47A8MTI9 375 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 TTC34A8MYJ7 566 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 HMGB1P1B2RPK0 211 aaPredicted RBP6.55□□□□□ -1.36
VPS50-212ENST00000476413 SPTLC2O15270 562 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 FOXN1O15353 648 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 METTL18O95568 372 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 F9P00740 461 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 WEE2P0C1S8 567 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 VPS41P49754 854 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 CACNA2D1P54289 1103 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 ABHD18Q0P651 414 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 SEMA3AQ14563 771 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 GPR68Q15743 365 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 SH2D4BQ5SQS7 431 aa6.55□□□□□ -1.36
VPS50-212ENST00000476413 ZNF362Q5T0B9 420 aaPredicted RBP6.55□□□□□ -1.36
VPS50-212ENST00000476413 UBAP2Q5T6F2 1119 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms