RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SLC26A11Q86WA9 606 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 SPATA22Q8NHS9 363 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 GDPD5Q8WTR4 605 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CERS2Q96G23 380 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 MRIQ9BWK5 157 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 KLHL4Q9C0H6 718 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 ELOVL4Q9GZR5 314 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 ADNPQ9H2P0 1102 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 EPS8L2Q9H6S3 715 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PNMA8BQ9ULN7 279 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PPM1HQ9ULR3 514 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 DOLKQ9UPQ8 538 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 SHOC2Q9UQ13 582 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 LAMA1P25391 3075 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 FAM155AB1AL88 458 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 MDM4O15151 490 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 MSI1O43347 362 aaKnown RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 MGRN1O60291 552 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 ZBTB11O95625 1053 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 MT-CYBP00156 380 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PRKCGP05129 697 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 OR4Q2P0C623 313 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 ACRP10323 421 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 MPSTP25325 297 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PAPOLAP51003 745 aaKnown RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 LSM3P62310 102 aaKnown RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 TSPY1Q01534 308 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 TNFAIP2Q03169 654 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CENPCQ03188 943 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CRYMQ14894 314 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 MORF4L2Q15014 288 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 GALNTL6Q49A17 601 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 LDLRAP1Q5SW96 308 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 SPOUT1Q5T280 376 aaKnown RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 COL13A1Q5TAT6 717 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 TTC39BQ5VTQ0 682 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CGB2Q6NT52 195 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 NAPRTQ6XQN6 538 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 BNIPLQ7Z465 357 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PIGWQ7Z7B1 504 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CCDC185Q8N715 623 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 ELMO1Q92556 727 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CDT1Q9H211 546 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 SYBUQ9NX95 663 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 ABI2Q9NYB9 513 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 MPP6Q9NZW5 540 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 HCSTQ9UBK5 93 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 ZNF112Q9UJU3 913 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 TLL2Q9Y6L7 1015 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 EP300Q09472 2414 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 GNGT2O14610 69 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 GSC2O15499 205 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 MAP3K13O43283 966 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 DNAJA2O60884 412 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 BAIAP3O94812 1187 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CLIC3O95833 236 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 SLC10A3P09131 477 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 GFAPP14136 432 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 RFX1P22670 979 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PTPN7P35236 360 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 GARSP41250 739 aaKnown RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PIK3CGP48736 1102 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 SNX16P57768 344 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 POU5F1Q01860 360 aaKnown RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 NRG1Q02297 640 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 GCNT1Q02742 428 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PDK4Q16654 411 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 SPDYAQ5MJ70 313 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 UNC5AQ6ZN44 842 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 OTOP3Q7RTS5 596 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 TAS1R3Q7RTX0 852 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CACUL1Q86Y37 369 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 TREML1Q86YW5 311 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 ZNF786Q8N393 782 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 TTC13Q8NBP0 860 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 KCTD4Q8WVF5 259 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 NCLNQ969V3 563 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 MPP4Q96JB8 637 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 KLHL5Q96PQ7 755 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PRDM12Q9H4Q4 367 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 EBF3Q9H4W6 596 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 DCLRE1BQ9H816 532 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 RSAD1Q9HA92 442 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PCDH9Q9HC56 1237 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CHRAC1Q9NRG0 131 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 ANKEF1Q9NU02 776 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CYTH4Q9UIA0 394 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 UBIAD1Q9Y5Z9 338 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CLUHO75153 1309 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 RIF1Q5UIP0 2472 aaKnown RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 A0A096LPK6 155 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 TMEM191CA6NGB0 347 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 TTC36A6NLP5 189 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 H0YCG3 227 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CXCL11O14625 94 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CASQ2O14958 399 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PEX11AO75192 247 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 ZWINTO95229 277 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 APOEP02649 317 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 INHAP05111 366 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms