RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 ARFGAP1Q8N6T3 406 aa30.5■■■□□ 2.47
HOXB3-208ENST00000476342 IGSF8Q969P0 613 aa30.5■■■□□ 2.47
HOXB3-208ENST00000476342 CHRDQ9H2X0 955 aa30.5■■■□□ 2.47
HOXB3-208ENST00000476342 DLGAP2Q9P1A6 1054 aa30.5■■■□□ 2.47
HOXB3-208ENST00000476342 PCSK1NQ9UHG2 260 aa30.5■■■□□ 2.47
HOXB3-208ENST00000476342 SNX10Q9Y5X0 201 aa30.5■■■□□ 2.47
HOXB3-208ENST00000476342 KMT2EQ8IZD2 1858 aa30.5■■■□□ 2.47
HOXB3-208ENST00000476342 H0Y626 953 aa30.49■■■□□ 2.47
HOXB3-208ENST00000476342 SRGAP2O75044 1071 aa30.49■■■□□ 2.47
HOXB3-208ENST00000476342 KRT83P78385 493 aa30.49■■■□□ 2.47
HOXB3-208ENST00000476342 FIBINQ8TAL6 211 aa30.49■■■□□ 2.47
HOXB3-208ENST00000476342 EZH1Q92800 747 aaPredicted RBP30.49■■■□□ 2.47
HOXB3-208ENST00000476342 USP18Q9UMW8 372 aa30.49■■■□□ 2.47
HOXB3-208ENST00000476342 IGLV3-10A0A075B6K4 115 aa30.48■■■□□ 2.47
HOXB3-208ENST00000476342 K7EQS6 105 aa30.48■■■□□ 2.47
HOXB3-208ENST00000476342 NRDCO43847 1150 aa30.48■■■□□ 2.47
HOXB3-208ENST00000476342 RNF40O75150 1001 aa30.48■■■□□ 2.47
HOXB3-208ENST00000476342 CLDN11O75508 207 aa30.48■■■□□ 2.47
HOXB3-208ENST00000476342 MTA2O94776 668 aa30.48■■■□□ 2.47
HOXB3-208ENST00000476342 TCEAL1Q15170 157 aa30.48■■■□□ 2.47
HOXB3-208ENST00000476342 CHST9Q7L1S5 443 aa30.48■■■□□ 2.47
HOXB3-208ENST00000476342 ZNF683Q8IZ20 524 aa30.48■■■□□ 2.47
HOXB3-208ENST00000476342 CCAR2Q8N163 923 aaKnown RBP30.48■■■□□ 2.47
HOXB3-208ENST00000476342 DOCK4Q8N1I0 1966 aa30.48■■■□□ 2.47
HOXB3-208ENST00000476342 PROSCO94903 275 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 HLA-FP30511 346 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 CDH4P55283 916 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 ERMARDQ5T6L9 678 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 CIR1Q86X95 450 aaPredicted RBP30.47■■■□□ 2.47
HOXB3-208ENST00000476342 TXLNBQ8N3L3 684 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 WFIKKN2Q8TEU8 576 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 ABCB8Q9NUT2 735 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 PPARGC1AQ9UBK2 798 aaKnown RBP30.47■■■□□ 2.47
HOXB3-208ENST00000476342 AP4E1Q9UPM8 1137 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 ATG2BQ96BY7 2078 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 DRGXA6NNA5 263 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 ARHGAP25P42331 645 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 PSTKQ8IV42 348 aaKnown RBP30.47■■■□□ 2.47
HOXB3-208ENST00000476342 LRRC8AQ8IWT6 810 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 AHI1Q8N157 1196 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 DDX51Q8N8A6 666 aaKnown RBP eCLIP30.47■■■□□ 2.473e-6■■■□□ 16.3
HOXB3-208ENST00000476342 WFDC5Q8TCV5 224 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 ZYG11BQ9C0D3 744 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 GGA2Q9UJY4 613 aa30.47■■■□□ 2.47
HOXB3-208ENST00000476342 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP30.46■■■□□ 2.47
HOXB3-208ENST00000476342 PABPC1P11940 636 aaKnown RBP30.46■■■□□ 2.47
HOXB3-208ENST00000476342 L1CAMP32004 1257 aa30.46■■■□□ 2.47
HOXB3-208ENST00000476342 SEC13P55735 322 aa30.46■■■□□ 2.47
HOXB3-208ENST00000476342 OXCT1P55809 520 aa30.46■■■□□ 2.47
HOXB3-208ENST00000476342 ZNF177Q13360 481 aaPredicted RBP30.46■■■□□ 2.47
HOXB3-208ENST00000476342 EIF4HQ15056 248 aaKnown RBP30.46■■■□□ 2.47
HOXB3-208ENST00000476342 HADHQ16836 314 aaKnown RBP30.46■■■□□ 2.47
HOXB3-208ENST00000476342 GEN1Q17RS7 908 aa30.46■■■□□ 2.47
HOXB3-208ENST00000476342 DAB2IPQ5VWQ8 1189 aa30.46■■■□□ 2.47
HOXB3-208ENST00000476342 Q6ZS52 159 aa30.46■■■□□ 2.47
HOXB3-208ENST00000476342 SFTPA1Q8IWL2 248 aa30.46■■■□□ 2.47
HOXB3-208ENST00000476342 ACRBPQ8NEB7 543 aa30.46■■■□□ 2.47
HOXB3-208ENST00000476342 KCNV2Q8TDN2 545 aa30.46■■■□□ 2.47
HOXB3-208ENST00000476342 PEBP4Q96S96 227 aa30.46■■■□□ 2.47
HOXB3-208ENST00000476342 EPAS1Q99814 870 aa30.46■■■□□ 2.47
HOXB3-208ENST00000476342 SNRNP25Q9BV90 132 aaKnown RBP30.46■■■□□ 2.47
HOXB3-208ENST00000476342 KIAA1522Q9P206 1035 aaPredicted RBP30.46■■■□□ 2.47
HOXB3-208ENST00000476342 STARD13Q9Y3M8 1113 aa30.46■■■□□ 2.47
HOXB3-208ENST00000476342 A0A0A6YYK5 440 aaPredicted RBP30.45■■■□□ 2.46
HOXB3-208ENST00000476342 ARHGAP6O43182 974 aa30.45■■■□□ 2.46
HOXB3-208ENST00000476342 ATG13O75143 517 aa30.45■■■□□ 2.46
HOXB3-208ENST00000476342 MAN1A1P33908 653 aa30.45■■■□□ 2.46
HOXB3-208ENST00000476342 NOP2P46087 812 aaKnown RBP30.45■■■□□ 2.46
HOXB3-208ENST00000476342 NUBP1P53384 320 aa30.45■■■□□ 2.46
HOXB3-208ENST00000476342 MRPS21P82921 87 aaKnown RBP30.45■■■□□ 2.46
HOXB3-208ENST00000476342 BOLA3Q53S33 107 aa30.45■■■□□ 2.46
HOXB3-208ENST00000476342 MANEALQ5VSG8 457 aa30.45■■■□□ 2.46
HOXB3-208ENST00000476342 KIAA1328Q86T90 577 aa30.45■■■□□ 2.46
HOXB3-208ENST00000476342 UCMAQ8WVF2 138 aa30.45■■■□□ 2.46
HOXB3-208ENST00000476342 TBC1D31Q96DN5 1066 aa30.45■■■□□ 2.46
HOXB3-208ENST00000476342 RETREG1Q9H6L5 497 aa30.45■■■□□ 2.46
HOXB3-208ENST00000476342 REXO2Q9Y3B8 237 aaKnown RBP30.45■■■□□ 2.46
HOXB3-208ENST00000476342 PRRT4C9JH25 899 aa30.44■■■□□ 2.46
HOXB3-208ENST00000476342 CNTN5O94779 1100 aa30.44■■■□□ 2.46
HOXB3-208ENST00000476342 LRIG2O94898 1065 aa30.44■■■□□ 2.46
HOXB3-208ENST00000476342 SSR1P43307 286 aaKnown RBP30.44■■■□□ 2.46
HOXB3-208ENST00000476342 IRAK1P51617 712 aa30.44■■■□□ 2.46
HOXB3-208ENST00000476342 VAV2P52735 878 aa30.44■■■□□ 2.46
HOXB3-208ENST00000476342 LMAN2Q12907 356 aa30.44■■■□□ 2.46
HOXB3-208ENST00000476342 MESDQ14696 234 aa30.44■■■□□ 2.46
HOXB3-208ENST00000476342 E2F5Q15329 346 aa30.44■■■□□ 2.46
HOXB3-208ENST00000476342 ALFQ53S48 1182 aa30.44■■■□□ 2.46
HOXB3-208ENST00000476342 RWDD4Q6NW29 188 aaKnown RBP30.44■■■□□ 2.46
HOXB3-208ENST00000476342 PYROXD2Q8N2H3 581 aa30.44■■■□□ 2.46
HOXB3-208ENST00000476342 DTWD2Q8NBA8 298 aa30.44■■■□□ 2.46
HOXB3-208ENST00000476342 RPLP0P6Q8NHW5 317 aa30.44■■■□□ 2.46
HOXB3-208ENST00000476342 DHX35Q9H5Z1 703 aaKnown RBP30.44■■■□□ 2.46
HOXB3-208ENST00000476342 MPP6Q9NZW5 540 aa30.44■■■□□ 2.46
HOXB3-208ENST00000476342 ZNF318Q5VUA4 2279 aa30.44■■■□□ 2.46
HOXB3-208ENST00000476342 FAM72CH0Y354 149 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 TIMM44O43615 452 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 MOCS3O95396 460 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 CD70P32970 193 aa30.43■■■□□ 2.46
HOXB3-208ENST00000476342 KIR2DL1P43626 348 aaPredicted RBP30.43■■■□□ 2.46
HOXB3-208ENST00000476342 HADHBP55084 474 aaKnown RBP30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms