RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 LAYNQ6UX15 382 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 USP30Q70CQ3 517 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 BEND5Q7L4P6 421 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 TMPRSS7Q7RTY8 843 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 MFN1Q8IWA4 741 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 ELOA2Q8IYF1 753 aaPredicted RBP13.61□□□□□ -0.23
MRPL55-228ENST00000476267 PPM1KQ8N3J5 372 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 ZNF557Q8N988 423 aaPredicted RBP13.61□□□□□ -0.23
MRPL55-228ENST00000476267 KDM1BQ8NB78 822 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 HJURPQ8NCD3 748 aaPredicted RBP13.61□□□□□ -0.23
MRPL55-228ENST00000476267 SETD7Q8WTS6 366 aaKnown RBP13.61□□□□□ -0.23
MRPL55-228ENST00000476267 SNX19Q92543 992 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 GOLGA1Q92805 767 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 IGSF8Q969P0 613 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 KREMEN1Q96MU8 473 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 NUCKS1Q9H1E3 243 aaKnown RBP13.61□□□□□ -0.23
MRPL55-228ENST00000476267 PABPC3Q9H361 631 aaKnown RBP13.61□□□□□ -0.23
MRPL55-228ENST00000476267 SGK2Q9HBY8 427 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 SUN2Q9UH99 717 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 MAN1B1Q9UKM7 699 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 LHX6Q9UPM6 363 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 TLR6Q9Y2C9 796 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 ANKRD6Q9Y2G4 727 aa13.61□□□□□ -0.23
MRPL55-228ENST00000476267 FAM208BQ5VWN6 2430 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 PPP1R3GB7ZBB8 358 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 PSMA7O14818 248 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 PCDHGA12O60330 932 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 SIN3BO75182 1162 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 IGLV3-25P01717 112 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 ASLP04424 464 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 CSKP41240 450 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 MARSP56192 900 aaKnown RBP13.6□□□□□ -0.23
MRPL55-228ENST00000476267 TTC31Q49AM3 519 aaPredicted RBP13.6□□□□□ -0.23
MRPL55-228ENST00000476267 C9orf64Q5T6V5 341 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 RRAGAQ7L523 313 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 TAC4Q86UU9 113 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 TRIM59Q8IWR1 403 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 RHBDD1Q8TEB9 315 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 SERPINB11Q96P15 392 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 CDC6Q99741 560 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 EBF2Q9HAK2 575 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 ADAMTS1Q9UHI8 967 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 XPO7Q9UIA9 1087 aaKnown RBP13.6□□□□□ -0.23
MRPL55-228ENST00000476267 SCML1Q9UN30 329 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 NAALADL1Q9UQQ1 740 aa13.6□□□□□ -0.23
MRPL55-228ENST00000476267 SMG1Q96Q15 3661 aaKnown RBP13.6□□□□□ -0.23
MRPL55-228ENST00000476267 H0Y8X5 98 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 FSBPO95073 299 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 LUC7L3O95232 432 aaKnown RBP13.59□□□□□ -0.23
MRPL55-228ENST00000476267 CTSOP43234 321 aaPredicted RBP13.59□□□□□ -0.23
MRPL55-228ENST00000476267 CAMK2BQ13554 666 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 TEAD4Q15561 434 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 MEA1Q16626 185 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 PITRM1Q5JRX3 1037 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 SYPL2Q5VXT5 272 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 KIAA0895LQ68EN5 471 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 MMS22LQ6ZRQ5 1243 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 SCUBE3Q8IX30 993 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 EHBP1Q8NDI1 1231 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 MDM1Q8TC05 714 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 STK32AQ8WU08 396 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 SLC4A5Q9BY07 1137 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 MIS12Q9H081 205 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 STIM2Q9P246 746 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 DKK4Q9UBT3 224 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 CYTH4Q9UIA0 394 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 ERVW-1Q9UQF0 538 aa13.59□□□□□ -0.23
MRPL55-228ENST00000476267 A0A1W2PPC4 97 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 KCNK3O14649 394 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 VILLO15195 856 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 WNT1P04628 370 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 SRPRAP08240 638 aaKnown RBP13.58□□□□□ -0.24
MRPL55-228ENST00000476267 PPP1R2P41236 205 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 CCT8P50990 548 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 GALCP54803 685 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 RACK1P63244 317 aaKnown RBP13.58□□□□□ -0.24
MRPL55-228ENST00000476267 KCNJ12Q14500 433 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 CST6Q15828 149 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 CCDC40Q4G0X9 1142 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 DCAF6Q58WW2 860 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 ISM2Q6H9L7 571 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 DHX40Q8IX18 779 aaKnown RBP13.58□□□□□ -0.24
MRPL55-228ENST00000476267 CFAP52Q8N1V2 620 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 CARNMT1Q8N4J0 409 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 ADAM32Q8TC27 787 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 FAM131CQ96AQ9 280 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 FAM129BQ96TA1 746 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 DDX50Q9BQ39 737 aaKnown RBP13.58□□□□□ -0.24
MRPL55-228ENST00000476267 CCDC86Q9H6F5 360 aaKnown RBP13.58□□□□□ -0.24
MRPL55-228ENST00000476267 FZD4Q9ULV1 537 aa13.58□□□□□ -0.24
MRPL55-228ENST00000476267 A0A1B0GTQ1 180 aa13.57□□□□□ -0.24
MRPL55-228ENST00000476267 A0A1W2PP55 124 aa13.57□□□□□ -0.24
MRPL55-228ENST00000476267 TARSL2A2RTX5 802 aaKnown RBP13.57□□□□□ -0.24
MRPL55-228ENST00000476267 TTC34A8MYJ7 566 aa13.57□□□□□ -0.24
MRPL55-228ENST00000476267 MID1O15344 667 aa13.57□□□□□ -0.24
MRPL55-228ENST00000476267 SART1O43290 800 aaKnown RBP13.57□□□□□ -0.24
MRPL55-228ENST00000476267 TNFSF14O43557 240 aa13.57□□□□□ -0.24
MRPL55-228ENST00000476267 GRK6P43250 576 aa13.57□□□□□ -0.24
MRPL55-228ENST00000476267 PITX1P78337 314 aaPredicted RBP13.57□□□□□ -0.24
MRPL55-228ENST00000476267 KCNH2Q12809 1159 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms