RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 XXYLT1Q8NBI6 393 aa14.55□□□□□ -0.08
FAM3A-218ENST00000475657 CYB5D2Q8WUJ1 264 aa14.55□□□□□ -0.08
FAM3A-218ENST00000475657 GZF1Q9H116 711 aaPredicted RBP14.55□□□□□ -0.08
FAM3A-218ENST00000475657 POLR1BQ9H9Y6 1135 aa14.55□□□□□ -0.08
FAM3A-218ENST00000475657 ASCL3Q9NQ33 180 aa14.55□□□□□ -0.08
FAM3A-218ENST00000475657 THSD1Q9NS62 852 aa14.55□□□□□ -0.08
FAM3A-218ENST00000475657 FBXL12Q9NXK8 326 aa14.55□□□□□ -0.08
FAM3A-218ENST00000475657 SERTAD1Q9UHV2 236 aa14.55□□□□□ -0.08
FAM3A-218ENST00000475657 HOOK1Q9UJC3 728 aaKnown RBP14.55□□□□□ -0.08
FAM3A-218ENST00000475657 PCDHB1Q9Y5F3 818 aa14.55□□□□□ -0.08
FAM3A-218ENST00000475657 USP3Q9Y6I4 520 aa14.55□□□□□ -0.08
FAM3A-218ENST00000475657 SPTAN1Q13813 2472 aaKnown RBP14.55□□□□□ -0.08
FAM3A-218ENST00000475657 MYO9AB2RTY4 2548 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 FAM47DPA6NHR8 397 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 TERTO14746 1132 aaKnown RBP14.54□□□□□ -0.08
FAM3A-218ENST00000475657 WNT9AO14904 365 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 PHACTR2O75167 634 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 MYL1P05976 194 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 ATP5BP06576 529 aaKnown RBP14.54□□□□□ -0.08
FAM3A-218ENST00000475657 HOXD9P28356 352 aaPredicted RBP14.54□□□□□ -0.08
FAM3A-218ENST00000475657 SNRPFP62306 86 aaKnown RBP14.54□□□□□ -0.08
FAM3A-218ENST00000475657 GABREP78334 506 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 ZNF699Q32M78 642 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 CHST9Q7L1S5 443 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 IQCHQ86VS3 1027 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 AHI1Q8N157 1196 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 MFSD2AQ8NA29 543 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 PLEKHO2Q8TD55 490 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 DEPDC7Q96QD5 511 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 SDCBP2Q9H190 292 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 NUP62CLQ9H1M0 184 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 CLSTN2Q9H4D0 955 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 FZD4Q9ULV1 537 aa14.54□□□□□ -0.08
FAM3A-218ENST00000475657 HEMK1Q9Y5R4 338 aaPredicted RBP14.54□□□□□ -0.08
FAM3A-218ENST00000475657 LZTS3O60299 673 aaPredicted RBP14.53□□□□□ -0.08
FAM3A-218ENST00000475657 EXOC3O60645 756 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 MAGEC1O60732 1142 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 RNASEH1O60930 286 aaKnown RBP14.53□□□□□ -0.08
FAM3A-218ENST00000475657 P4HA1P13674 534 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 TRIM21P19474 475 aaKnown RBP14.53□□□□□ -0.08
FAM3A-218ENST00000475657 NDST1P52848 882 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 AP3M2P53677 418 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 SKOR1P84550 965 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 EHHADHQ08426 723 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 OVGP1Q12889 678 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 CCDC183Q5T5S1 534 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 SCARA5Q6ZMJ2 495 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 C12orf29Q8N999 325 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 GANCQ8TET4 914 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 CCDC97Q96F63 343 aaPredicted RBP14.53□□□□□ -0.08
FAM3A-218ENST00000475657 SERAC1Q96JX3 654 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 FAM117AQ9C073 453 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 FAM49BQ9NUQ9 324 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 RASAL2Q9UJF2 1139 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 STRIP2Q9ULQ0 834 aa14.53□□□□□ -0.08
FAM3A-218ENST00000475657 BOD1L1Q8NFC6 3051 aa14.52□□□□□ -0.08
FAM3A-218ENST00000475657 TRIM38O00635 465 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 LATO43561 262 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 SIGLEC6O43699 453 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 OPA1O60313 960 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 USP12O75317 370 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 HMBSP08397 361 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 PABPC1P11940 636 aaKnown RBP14.52□□□□□ -0.09
FAM3A-218ENST00000475657 EFEMP1Q12805 493 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 BIRC3Q13489 604 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 NCOA4Q13772 614 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 ARID5BQ14865 1188 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 TRIP4Q15650 581 aaPredicted RBP14.52□□□□□ -0.09
FAM3A-218ENST00000475657 KNOP1Q1ED39 458 aaKnown RBP14.52□□□□□ -0.09
FAM3A-218ENST00000475657 MBLAC2Q68D91 279 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 CNNM4Q6P4Q7 775 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 ZNF574Q6ZN55 896 aaPredicted RBP14.52□□□□□ -0.09
FAM3A-218ENST00000475657 SPATS2Q86XZ4 545 aaKnown RBP14.52□□□□□ -0.09
FAM3A-218ENST00000475657 PLD4Q96BZ4 506 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 PAGE5Q96GU1 130 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 VCPIP1Q96JH7 1222 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 NEUROG2Q9H2A3 272 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 ABCB8Q9NUT2 735 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 MARCH2Q9P0N8 246 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 SERGEFQ9UGK8 458 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 GGA2Q9UJY4 613 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 STOML2Q9UJZ1 356 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 TP53BP1Q12888 1972 aaPredicted RBP14.52□□□□□ -0.09
FAM3A-218ENST00000475657 PLXNA2O75051 1894 aa14.52□□□□□ -0.09
FAM3A-218ENST00000475657 GP1BAP07359 652 aa14.51□□□□□ -0.09
FAM3A-218ENST00000475657 ADORA2BP29275 332 aa14.51□□□□□ -0.09
FAM3A-218ENST00000475657 NUDT1P36639 197 aa14.51□□□□□ -0.09
FAM3A-218ENST00000475657 DLG4P78352 724 aa14.51□□□□□ -0.09
FAM3A-218ENST00000475657 CLDN10P78369 228 aa14.51□□□□□ -0.09
FAM3A-218ENST00000475657 NFATC3Q12968 1075 aa14.51□□□□□ -0.09
FAM3A-218ENST00000475657 STK4Q13043 487 aa14.51□□□□□ -0.09
FAM3A-218ENST00000475657 CST6Q15828 149 aa14.51□□□□□ -0.09
FAM3A-218ENST00000475657 KIAA1614Q5VZ46 1190 aa14.51□□□□□ -0.09
FAM3A-218ENST00000475657 NAPEPLDQ6IQ20 393 aa14.51□□□□□ -0.09
FAM3A-218ENST00000475657 CAVIN1Q6NZI2 390 aaKnown RBP14.51□□□□□ -0.09
FAM3A-218ENST00000475657 ATG14Q6ZNE5 492 aa14.51□□□□□ -0.09
FAM3A-218ENST00000475657 ZC3H3Q8IXZ2 948 aaKnown RBP14.51□□□□□ -0.09
FAM3A-218ENST00000475657 ARHGAP18Q8N392 663 aa14.51□□□□□ -0.09
FAM3A-218ENST00000475657 KDM1BQ8NB78 822 aa14.51□□□□□ -0.09
FAM3A-218ENST00000475657 GRAMD1AQ96CP6 724 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms