RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 FSIP1Q8NA03 581 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 PDE11AQ9HCR9 933 aa6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 SRP68Q9UHB9 627 aaKnown RBP6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 COPG1Q9Y678 874 aaKnown RBP6.28□□□□□ -1.4
TM9SF3-204ENST00000475401 DPPA5A6NC42 116 aa6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 E7EVH7 732 aa6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 KRT38O76015 456 aa6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 ALDOCP09972 364 aaKnown RBP6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 RFPL3SP0C7P2 107 aa6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 DHRS4L1P0CG22 281 aa6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 PEPDP12955 493 aa6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 IGFBP2P18065 325 aa6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 PLCD1P51178 756 aa6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 RBM5P52756 815 aaKnown RBP eCLIP6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 FAM3BP58499 235 aaPredicted RBP6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 ADGRF4Q8IZF3 695 aa6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 DENND1AQ8TEH3 1009 aa6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 ZFPM2Q8WW38 1151 aa6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 THAP4Q8WY91 577 aa6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 SDCCAG3Q96C92 435 aa6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 SIGLEC11Q96RL6 698 aa6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 SLC29A3Q9BZD2 475 aa6.27□□□□□ -1.41
TM9SF3-204ENST00000475401 SLC22A23A1A5C7 686 aa6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 KAT7O95251 611 aa6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 VEGFAP15692 232 aaPredicted RBP6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 HOXA7P31268 230 aaPredicted RBP6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 PPM1FP49593 454 aaPredicted RBP6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 ARL4CP56559 192 aa6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 SHC2P98077 582 aa6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 EARS2Q5JPH6 523 aaKnown RBP6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 COLEC12Q5KU26 742 aa6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 GORABQ5T7V8 394 aa6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 PXDC1Q5TGL8 231 aa6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 ZNF793Q6ZN11 406 aa6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 FAM57BQ71RH2 274 aa6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 ADGRF3Q8IZF5 1079 aa6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 ENDOVQ8N8Q3 282 aaKnown RBP6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 ISCA1Q9BUE6 129 aa6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 SCNM1Q9BWG6 230 aa6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 OSBPL5Q9H0X9 879 aaPredicted RBP6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 KCND3Q9UK17 655 aa6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 TNFSF13BQ9Y275 285 aa6.26□□□□□ -1.41
TM9SF3-204ENST00000475401 C2CD4BA6NLJ0 364 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 E5RJQ4 531 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 F8W810 466 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 TP73O15350 636 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 TFRCP02786 760 aaKnown RBP6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 ADD2P35612 726 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 SOX2P48431 317 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 OAZ1P54368 228 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 CFHR1Q03591 330 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 DHX8Q14562 1220 aaKnown RBP6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 C10orf76Q5T2E6 689 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 ZNF474Q6S9Z5 364 aaPredicted RBP6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 LRIG3Q6UXM1 1119 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 SYNE3Q6ZMZ3 975 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 SYT13Q7L8C5 426 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 ANKRD13BQ86YJ7 626 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 SLC2A12Q8TD20 617 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 PIGOQ8TEQ8 1089 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 CLEC4CQ8WTT0 213 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 AFG1LQ8WV93 481 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 RPL36ALQ969Q0 106 aaKnown RBP6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 TBC1D20Q96BZ9 403 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 TUBB6Q9BUF5 446 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 TUBA8Q9NY65 449 aaPredicted RBP6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 SLC25A13Q9UJS0 675 aa6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 ZNF335Q9H4Z2 1342 aaPredicted RBP6.25□□□□□ -1.41
TM9SF3-204ENST00000475401 LMTK3Q96Q04 1460 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 WDR91A4D1P6 747 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 NFATC1O95644 943 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 CTSAP10619 480 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 PAPOLAP51003 745 aaKnown RBP6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 PRKAA2P54646 552 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 PDCLQ13371 301 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 CUL4BQ13620 913 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 ALKBH1Q13686 389 aaKnown RBP6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 TAF5Q15542 800 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 SMAD1Q15797 465 aaKnown RBP6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 SMC5Q8IY18 1101 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 OR52N4Q8NGI2 321 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 CSGALNACT1Q8TDX6 532 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 VOPP1Q96AW1 172 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 NPAS1Q99742 590 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 GATA5Q9BWX5 397 aaPredicted RBP6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 MYH16Q9H6N6 1097 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 G6PC2Q9NQR9 355 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 PAPOLBQ9NRJ5 636 aaKnown RBP6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 TMEM45AQ9NWC5 275 aa6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 TRNAU1APQ9NX07 287 aaKnown RBP6.24□□□□□ -1.41
TM9SF3-204ENST00000475401 DNAJC9-AS1A6NH13 148 aa6.23□□□□□ -1.41
TM9SF3-204ENST00000475401 MCIDASD6RGH6 385 aa6.23□□□□□ -1.41
TM9SF3-204ENST00000475401 PRPF4O43172 522 aaKnown RBP eCLIP6.23□□□□□ -1.41
TM9SF3-204ENST00000475401 PIP5K1CO60331 668 aa6.23□□□□□ -1.41
TM9SF3-204ENST00000475401 CCNT1O60563 726 aaKnown RBP6.23□□□□□ -1.41
TM9SF3-204ENST00000475401 FAM155BO75949 473 aa6.23□□□□□ -1.41
TM9SF3-204ENST00000475401 HEXIM1O94992 359 aaKnown RBP6.23□□□□□ -1.41
TM9SF3-204ENST00000475401 CIITAP33076 1130 aa6.23□□□□□ -1.41
TM9SF3-204ENST00000475401 CCT5P48643 541 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms