RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 EIF2S3P41091 472 aaKnown RBP21.25■□□□□ 0.99
VPS36-203ENST00000475375 ARRB1P49407 418 aaPredicted RBP21.25■□□□□ 0.99
VPS36-203ENST00000475375 DNM1Q05193 864 aaKnown RBP21.25■□□□□ 0.99
VPS36-203ENST00000475375 TARDBPQ13148 414 aaKnown RBP eCLIP21.25■□□□□ 0.99
VPS36-203ENST00000475375 CST6Q15828 149 aa21.25■□□□□ 0.99
VPS36-203ENST00000475375 HNRNPA1L2Q32P51 320 aaKnown RBP21.25■□□□□ 0.99
VPS36-203ENST00000475375 HES3Q5TGS1 186 aa21.25■□□□□ 0.99
VPS36-203ENST00000475375 MMAAQ8IVH4 418 aaKnown RBP21.25■□□□□ 0.99
VPS36-203ENST00000475375 CCDC117Q8IWD4 279 aaPredicted RBP21.25■□□□□ 0.99
VPS36-203ENST00000475375 UNC45BQ8IWX7 931 aa21.25■□□□□ 0.99
VPS36-203ENST00000475375 OR2T34Q8NGX1 318 aa21.25■□□□□ 0.99
VPS36-203ENST00000475375 EEF2KMTQ96G04 330 aa21.25■□□□□ 0.99
VPS36-203ENST00000475375 YKT6O15498 198 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 IRAK2O43187 625 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 RHOBTB3O94955 611 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 ASLP04424 464 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 PRR29P0C7W0 189 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 SLC6A4P31645 630 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 CSKP41240 450 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 NUGGCQ68CJ6 796 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 CARNMT1Q8N4J0 409 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 HJURPQ8NCD3 748 aaPredicted RBP21.24■□□□□ 0.99
VPS36-203ENST00000475375 SAP25Q8TEE9 199 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 BAP1Q92560 729 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 EBF2Q9HAK2 575 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 CNGB3Q9NQW8 809 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 RCOR1Q9UKL0 485 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 CEP83Q9Y592 693 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 PLXNA2O75051 1894 aa21.24■□□□□ 0.99
VPS36-203ENST00000475375 TK2O00142 265 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 TLX3O43711 291 aaPredicted RBP21.23■□□□□ 0.99
VPS36-203ENST00000475375 ACSL4O60488 711 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 EPB41P11171 864 aaKnown RBP21.23■□□□□ 0.99
VPS36-203ENST00000475375 SLC8A1P32418 973 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 PSMD8P48556 350 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 ACADVLP49748 655 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 RGS7P49802 495 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 TBX4P57082 545 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 DAOAP59103 153 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 CDH18Q13634 790 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 SHBQ15464 509 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 SLC45A4Q5BKX6 768 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 FAM133BQ5BKY9 247 aaKnown RBP21.23■□□□□ 0.99
VPS36-203ENST00000475375 TCERG1LQ5VWI1 586 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 GUF1Q8N442 669 aaKnown RBP21.23■□□□□ 0.99
VPS36-203ENST00000475375 FIBINQ8TAL6 211 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 TTC17Q96AE7 1141 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 MYO19Q96H55 970 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 SERAC1Q96JX3 654 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 FCRL3Q96P31 734 aaPredicted RBP21.23■□□□□ 0.99
VPS36-203ENST00000475375 PRORYQ9H606 182 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 FZD4Q9ULV1 537 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 RAI2Q9Y5P3 530 aa21.23■□□□□ 0.99
VPS36-203ENST00000475375 COL5A1P20908 1838 aaPredicted RBP21.22■□□□□ 0.99
VPS36-203ENST00000475375 PIK3R2O00459 728 aa21.22■□□□□ 0.99
VPS36-203ENST00000475375 ATXN7O15265 892 aaPredicted RBP21.22■□□□□ 0.99
VPS36-203ENST00000475375 SETSIPP0DME0 302 aa21.22■□□□□ 0.99
VPS36-203ENST00000475375 CMA1P23946 247 aa21.22■□□□□ 0.99
VPS36-203ENST00000475375 EPHA8P29322 1005 aaPredicted RBP21.22■□□□□ 0.99
VPS36-203ENST00000475375 YWHAEP62258 255 aaKnown RBP21.22■□□□□ 0.99
VPS36-203ENST00000475375 CUL2Q13617 745 aa21.22■□□□□ 0.99
VPS36-203ENST00000475375 KCNJ12Q14500 433 aa21.22■□□□□ 0.99
VPS36-203ENST00000475375 DCAF17Q5H9S7 520 aaPredicted RBP21.22■□□□□ 0.99
VPS36-203ENST00000475375 MSANTD2Q6P1R3 559 aa21.22■□□□□ 0.99
VPS36-203ENST00000475375 OR14C36Q8NHC7 312 aa21.22■□□□□ 0.99
VPS36-203ENST00000475375 KCTD13Q8WZ19 329 aa21.22■□□□□ 0.99
VPS36-203ENST00000475375 DDX50Q9BQ39 737 aaKnown RBP21.22■□□□□ 0.99
VPS36-203ENST00000475375 IRX2Q9BZI1 471 aaPredicted RBP21.22■□□□□ 0.99
VPS36-203ENST00000475375 SHROOM3Q8TF72 1996 aa21.22■□□□□ 0.99
VPS36-203ENST00000475375 TTC34A8MYJ7 566 aa21.21■□□□□ 0.99
VPS36-203ENST00000475375 WNT9AO14904 365 aa21.21■□□□□ 0.99
VPS36-203ENST00000475375 VDRP11473 427 aa21.21■□□□□ 0.99
VPS36-203ENST00000475375 SYKP43405 635 aa21.21■□□□□ 0.99
VPS36-203ENST00000475375 CCR5P51681 352 aa21.21■□□□□ 0.99
VPS36-203ENST00000475375 RPS24P62847 133 aaKnown RBP21.21■□□□□ 0.99
VPS36-203ENST00000475375 C9orf64Q5T6V5 341 aa21.21■□□□□ 0.99
VPS36-203ENST00000475375 RNF219Q5W0B1 726 aaPredicted RBP21.21■□□□□ 0.99
VPS36-203ENST00000475375 SND1Q7KZF4 910 aaKnown RBP eCLIP21.21■□□□□ 0.99
VPS36-203ENST00000475375 MRGPRX3Q96LB0 322 aa21.21■□□□□ 0.99
VPS36-203ENST00000475375 PRICKLE1Q96MT3 831 aaPredicted RBP21.21■□□□□ 0.99
VPS36-203ENST00000475375 NRSN2Q9GZP1 204 aa21.21■□□□□ 0.99
VPS36-203ENST00000475375 ASH1LQ9NR48 2969 aaKnown RBP21.21■□□□□ 0.99
VPS36-203ENST00000475375 ADAMTS1Q9UHI8 967 aa21.21■□□□□ 0.99
VPS36-203ENST00000475375 INTS6Q9UL03 887 aaKnown RBP21.21■□□□□ 0.99
VPS36-203ENST00000475375 ERVW-1Q9UQF0 538 aa21.21■□□□□ 0.99
VPS36-203ENST00000475375 TP53BP1Q12888 1972 aaPredicted RBP21.21■□□□□ 0.99
VPS36-203ENST00000475375 EDDM13A0A1B0GTR0 161 aa21.2■□□□□ 0.98
VPS36-203ENST00000475375 A0A1W2PR77 199 aa21.2■□□□□ 0.98
VPS36-203ENST00000475375 TLR4O00206 839 aa21.2■□□□□ 0.98
VPS36-203ENST00000475375 O00370 1275 aa21.2■□□□□ 0.98
VPS36-203ENST00000475375 CETN3O15182 167 aa21.2■□□□□ 0.98
VPS36-203ENST00000475375 C1QL1O75973 258 aa21.2■□□□□ 0.98
VPS36-203ENST00000475375 MOCS3O95396 460 aa21.2■□□□□ 0.98
VPS36-203ENST00000475375 IGLV3-27P01718 113 aa21.2■□□□□ 0.98
VPS36-203ENST00000475375 GOT1P17174 413 aa21.2■□□□□ 0.98
VPS36-203ENST00000475375 CTSOP43234 321 aaPredicted RBP21.2■□□□□ 0.98
VPS36-203ENST00000475375 BNIP3Q12983 259 aa21.2■□□□□ 0.98
VPS36-203ENST00000475375 RTP5Q14D33 572 aa21.2■□□□□ 0.98
VPS36-203ENST00000475375 ZCWPW2Q504Y3 356 aa21.2■□□□□ 0.98
VPS36-203ENST00000475375 NADSYN1Q6IA69 706 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms