RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 ITM2CQ9NQX7 267 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 TAB2Q9NYJ8 693 aa12.69□□□□□ -0.38
SSR1-205ENST00000475213 TPRP12270 2363 aaKnown RBP12.68□□□□□ -0.38
SSR1-205ENST00000475213 SYNJ2BP-COX16A0A087WUM0 186 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 KCNU1A8MYU2 1149 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 CDX4O14627 284 aaPredicted RBP12.68□□□□□ -0.38
SSR1-205ENST00000475213 ATP5BP06576 529 aaKnown RBP12.68□□□□□ -0.38
SSR1-205ENST00000475213 DLDP09622 509 aaKnown RBP12.68□□□□□ -0.38
SSR1-205ENST00000475213 CYP11B1P15538 503 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 TACR2P21452 398 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 CD6P30203 668 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 HOXD12P35452 270 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 TPMTP51580 245 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 SNX16P57768 344 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 SLC6A3Q01959 620 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 CAMK2GQ13555 558 aaPredicted RBP12.68□□□□□ -0.38
SSR1-205ENST00000475213 KRT31Q15323 416 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 DUOXA1Q1HG43 343 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 FSCBQ5H9T9 825 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 CDKAL1Q5VV42 579 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 RAP1GAP2Q684P5 730 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 SLC23A3Q6PIS1 610 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 CHSY1Q86X52 802 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 CACUL1Q86Y37 369 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 LGI2Q8N0V4 545 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 ATP6V0D2Q8N8Y2 350 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 OR2T3Q8NH03 318 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 PRCCQ92733 491 aaPredicted RBP12.68□□□□□ -0.38
SSR1-205ENST00000475213 TTC17Q96AE7 1141 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 TOE1Q96GM8 510 aaKnown RBP12.68□□□□□ -0.38
SSR1-205ENST00000475213 ZNF419Q96HQ0 510 aaPredicted RBP12.68□□□□□ -0.38
SSR1-205ENST00000475213 HSPA12BQ96MM6 686 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 VPS16Q9H269 839 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 FAM204AQ9H8W3 233 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 TMEM9BQ9NQ34 198 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.68□□□□□ -0.38
SSR1-205ENST00000475213 DDIT4Q9NX09 232 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 WSB2Q9NYS7 404 aaPredicted RBP12.68□□□□□ -0.38
SSR1-205ENST00000475213 COX16Q9P0S2 106 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 INTS6Q9UL03 887 aaKnown RBP12.68□□□□□ -0.38
SSR1-205ENST00000475213 CEP83Q9Y592 693 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 PCDH15Q96QU1 1955 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 PCNX2A6NKB5 2137 aa12.68□□□□□ -0.38
SSR1-205ENST00000475213 GOLGA6L22H0YM25 854 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 DAB1O75553 588 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 LUC7L3O95232 432 aaKnown RBP12.67□□□□□ -0.38
SSR1-205ENST00000475213 ADRB1P08588 477 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 SLC2A3P11169 496 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 ACADMP11310 421 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 OXTRP30559 389 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 CCR1P32246 355 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 CDH5P33151 784 aaPredicted RBP12.67□□□□□ -0.38
SSR1-205ENST00000475213 CSKP41240 450 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 CDH18Q13634 790 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 TAF3Q5VWG9 929 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 DAB2IPQ5VWQ8 1189 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 MMS22LQ6ZRQ5 1243 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 SLC26A9Q7LBE3 791 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 CCDC117Q8IWD4 279 aaPredicted RBP12.67□□□□□ -0.38
SSR1-205ENST00000475213 TMEM35BQ8NCS4 154 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 ZNF397Q8NF99 534 aaPredicted RBP12.67□□□□□ -0.38
SSR1-205ENST00000475213 CEP76Q8TAP6 659 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 MYO19Q96H55 970 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 PRMT1Q99873 361 aaKnown RBP12.67□□□□□ -0.38
SSR1-205ENST00000475213 STK33Q9BYT3 514 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 PDCL3Q9H2J4 239 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 SYNCQ9H7C4 482 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 PRSS16Q9NQE7 514 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 SLC12A6Q9UHW9 1150 aa12.67□□□□□ -0.38
SSR1-205ENST00000475213 NYNRINQ9P2P1 1898 aaKnown RBP12.67□□□□□ -0.38
SSR1-205ENST00000475213 F5H5T6 163 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 F8VZ95 297 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 H0Y626 953 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 IGLV3-19P01714 112 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 CFIP05156 583 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 SERPINF2P08697 491 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 ENGP17813 658 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 ABCB4P21439 1286 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 NOS2P35228 1153 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 GABRB2P47870 512 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 KLK7P49862 253 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 NME3Q13232 169 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 PITRM1Q5JRX3 1037 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 SYCP2LQ5T4T6 812 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 SASS6Q6UVJ0 657 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 RABEPKQ7Z6M1 372 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 NOP9Q86U38 636 aaKnown RBP12.66□□□□□ -0.38
SSR1-205ENST00000475213 ZDHHC17Q8IUH5 632 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 RGL4Q8IZJ4 473 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 FOXJ1Q92949 421 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 RNF34Q969K3 372 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 NUP58Q9BVL2 599 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 GPR174Q9BXC1 333 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 GANQ9H2C0 597 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 CAPN10Q9HC96 672 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 FSCN3Q9NQT6 498 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 ANO10Q9NW15 660 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 FANCLQ9NW38 375 aa12.66□□□□□ -0.38
SSR1-205ENST00000475213 KIAA1522Q9P206 1035 aaPredicted RBP12.66□□□□□ -0.38
SSR1-205ENST00000475213 SUN2Q9UH99 717 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms