RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 MTAPQ13126 283 aa17.49■□□□□ 0.39
SCAF11-206ENST00000474828 PIGHQ14442 188 aaPredicted RBP17.49■□□□□ 0.39
SCAF11-206ENST00000474828 EIF4HQ15056 248 aaKnown RBP17.49■□□□□ 0.39
SCAF11-206ENST00000474828 CDO1Q16878 200 aa17.49■□□□□ 0.39
SCAF11-206ENST00000474828 ARL13BQ3SXY8 428 aa17.49■□□□□ 0.39
SCAF11-206ENST00000474828 RABGAP1LQ5R372 815 aa17.49■□□□□ 0.39
SCAF11-206ENST00000474828 Q6ZS52 159 aa17.49■□□□□ 0.39
SCAF11-206ENST00000474828 ALYREFQ86V81 257 aaKnown RBP17.49■□□□□ 0.39
SCAF11-206ENST00000474828 PSTKQ8IV42 348 aaKnown RBP17.49■□□□□ 0.39
SCAF11-206ENST00000474828 CCDC185Q8N715 623 aa17.49■□□□□ 0.39
SCAF11-206ENST00000474828 WFDC5Q8TCV5 224 aa17.49■□□□□ 0.39
SCAF11-206ENST00000474828 CTNNBL1Q8WYA6 563 aaPredicted RBP17.49■□□□□ 0.39
SCAF11-206ENST00000474828 NELL1Q92832 810 aa17.49■□□□□ 0.39
SCAF11-206ENST00000474828 NUP85Q9BW27 656 aa17.49■□□□□ 0.39
SCAF11-206ENST00000474828 TMPRSS4Q9NRS4 437 aa17.49■□□□□ 0.39
SCAF11-206ENST00000474828 MYO1AQ9UBC5 1043 aa17.49■□□□□ 0.39
SCAF11-206ENST00000474828 LCMT1Q9UIC8 334 aa17.49■□□□□ 0.39
SCAF11-206ENST00000474828 TIMM44O43615 452 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 TBL1XO60907 577 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 RNF40O75150 1001 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 PSMA2P25787 234 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 HOXC13P31276 330 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 PLK1P53350 603 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 SLC12A1Q13621 1099 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 GEN1Q17RS7 908 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 TMEM215Q68D42 235 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 NUDT18Q6ZVK8 323 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 C1orf210Q8IVY1 113 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 WFIKKN2Q8TEU8 576 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 BHMTQ93088 406 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 FBXO4Q9UKT5 387 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 VANGL2Q9ULK5 521 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 FZD10Q9ULW2 581 aa17.48■□□□□ 0.39
SCAF11-206ENST00000474828 EPN1Q9Y6I3 576 aaPredicted RBP17.48■□□□□ 0.39
SCAF11-206ENST00000474828 TYW5A2RUC4 315 aaKnown RBP17.47■□□□□ 0.39
SCAF11-206ENST00000474828 E9PAM4 449 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 NPC1O15118 1278 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 ATG13O75143 517 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 CLDN11O75508 207 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 NDUFA10O95299 355 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 DESP17661 470 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 L1CAMP32004 1257 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 HTR7P34969 479 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 IRAK1P51617 712 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 CDH4P55283 916 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 GSDMDP57764 484 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 KDSRQ06136 332 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 FSCBQ5H9T9 825 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 CXorf57Q6NSI4 855 aaKnown RBP17.47■□□□□ 0.39
SCAF11-206ENST00000474828 PKN3Q6P5Z2 889 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 SYT13Q7L8C5 426 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 ANKS1BQ7Z6G8 1248 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 SLFN11Q7Z7L1 901 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 ADIPOR2Q86V24 386 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 CCAR2Q8N163 923 aaKnown RBP17.47■□□□□ 0.39
SCAF11-206ENST00000474828 CFAP52Q8N1V2 620 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 TTC17Q96AE7 1141 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 ALG14Q96F25 216 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 CD248Q9HCU0 757 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 OR12D3Q9UGF7 316 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 IP6K2Q9UHH9 426 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 OR51B4Q9Y5P0 310 aa17.47■□□□□ 0.39
SCAF11-206ENST00000474828 TBC1D3BA6NDS4 549 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 GOLGA6L3A6NEY3 463 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 ANTXRLA6NF34 631 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 SOWAHDA6NJG2 315 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 FAM72CH0Y354 149 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 RNF8O76064 485 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 MIPP30301 263 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 MAN1A1P33908 653 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 CYLC1P35663 651 aaPredicted RBP17.46■□□□□ 0.39
SCAF11-206ENST00000474828 VASPP50552 380 aaPredicted RBP17.46■□□□□ 0.39
SCAF11-206ENST00000474828 OXCT1P55809 520 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 NHLH1Q02575 133 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 DMC1Q14565 340 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 ZNF528Q3MIS6 628 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 FAM72AQ5TYM5 149 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 FAM72DQ6L9T8 149 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 RAD9BQ6WBX8 426 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 NLRP14Q86W24 1093 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 FAM72BQ86X60 149 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 MFN1Q8IWA4 741 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 RHOT2Q8IXI1 618 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 AHI1Q8N157 1196 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 IL17RCQ8NAC3 791 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 ZNF564Q8TBZ8 553 aaPredicted RBP17.46■□□□□ 0.39
SCAF11-206ENST00000474828 RFFLQ8WZ73 363 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 RPRD1AQ96P16 312 aaPredicted RBP17.46■□□□□ 0.39
SCAF11-206ENST00000474828 PEBP4Q96S96 227 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 BAG1Q99933 345 aaPredicted RBP17.46■□□□□ 0.39
SCAF11-206ENST00000474828 SIK2Q9H0K1 926 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 ELOVL2Q9NXB9 296 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 ANAPC7Q9UJX3 599 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 GGA2Q9UJY4 613 aa17.46■□□□□ 0.39
SCAF11-206ENST00000474828 INTS6Q9UL03 887 aaKnown RBP17.46■□□□□ 0.39
SCAF11-206ENST00000474828 REXO2Q9Y3B8 237 aaKnown RBP17.46■□□□□ 0.39
SCAF11-206ENST00000474828 A0A0A6YYK5 440 aaPredicted RBP17.45■□□□□ 0.38
SCAF11-206ENST00000474828 K7ESF4 209 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 MYO1FO00160 1098 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 PROSCO94903 275 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms