RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 ATP6V0D2Q8N8Y2 350 aa21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 PPP1R13BQ96KQ4 1090 aa21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 KIAA1522Q9P206 1035 aaPredicted RBP21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 SCML1Q9UN30 329 aa21.08■□□□□ 0.97
PDLIM4-206ENST00000474421 H0Y626 953 aa21.07■□□□□ 0.96
PDLIM4-206ENST00000474421 HSF2BPO75031 334 aa21.07■□□□□ 0.96
PDLIM4-206ENST00000474421 RDXP35241 583 aaKnown RBP21.07■□□□□ 0.96
PDLIM4-206ENST00000474421 RPS14P62263 151 aaKnown RBP21.07■□□□□ 0.96
PDLIM4-206ENST00000474421 GRIK2Q13002 908 aa21.07■□□□□ 0.96
PDLIM4-206ENST00000474421 ARID5BQ14865 1188 aa21.07■□□□□ 0.96
PDLIM4-206ENST00000474421 IL27RAQ6UWB1 636 aa21.07■□□□□ 0.96
PDLIM4-206ENST00000474421 LGI2Q8N0V4 545 aa21.07■□□□□ 0.96
PDLIM4-206ENST00000474421 ZCCHC9Q8N567 271 aaKnown RBP21.07■□□□□ 0.96
PDLIM4-206ENST00000474421 BTBD1Q9H0C5 482 aa21.07■□□□□ 0.96
PDLIM4-206ENST00000474421 FAM204AQ9H8W3 233 aa21.07■□□□□ 0.96
PDLIM4-206ENST00000474421 CEP83Q9Y592 693 aa21.07■□□□□ 0.96
PDLIM4-206ENST00000474421 NUMA1Q14980 2115 aa21.07■□□□□ 0.96
PDLIM4-206ENST00000474421 KMT2BQ9UMN6 2715 aaPredicted RBP21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 KCNU1A8MYU2 1149 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 F5H5T6 163 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 RNASEH1O60930 286 aaKnown RBP21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 SRPRAP08240 638 aaKnown RBP21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 ABCB4P21439 1286 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 TACR2P21452 398 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 ERCC5P28715 1186 aaPredicted RBP21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 CCR1P32246 355 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 KRT9P35527 623 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 BPIFB4P59827 614 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 HNRNPA1L2Q32P51 320 aaKnown RBP21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 PITRM1Q5JRX3 1037 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 TTC39BQ5VTQ0 682 aaPredicted RBP21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 RAP1GAP2Q684P5 730 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 C11orf57Q6ZUT1 292 aaPredicted RBP21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 CFAP52Q8N1V2 620 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 MYEOVQ96EZ4 313 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 SLC2A13Q96QE2 648 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 CPXM1Q96SM3 734 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 RSPH9Q9H1X1 276 aaPredicted RBP21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 SGK2Q9HBY8 427 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 DNAJC12Q9UKB3 198 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 NCKAP1Q9Y2A7 1128 aa21.06■□□□□ 0.96
PDLIM4-206ENST00000474421 GJB3O75712 270 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 SEMA4FO95754 770 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 CD59P13987 128 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 ACSL1P33121 698 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 OXCT1P55809 520 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 SIM1P81133 766 aaPredicted RBP21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 APBA1Q02410 837 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 EIF4EBP2Q13542 120 aaPredicted RBP21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 SLC12A1Q13621 1099 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 VWA3BQ502W6 1294 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 RNF219Q5W0B1 726 aaPredicted RBP21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 USP30Q70CQ3 517 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 PASD1Q8IV76 773 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 WDTC1Q8N5D0 677 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 OR2I1PQ8NGU4 316 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 RNF34Q969K3 372 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 NDST4Q9H3R1 872 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 SYNCQ9H7C4 482 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 SIX2Q9NPC8 291 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 DDIT4Q9NX09 232 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 EIF2B4Q9UI10 523 aaKnown RBP21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 XPO7Q9UIA9 1087 aaKnown RBP21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 INTS6Q9UL03 887 aaKnown RBP21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 ERVW-1Q9UQF0 538 aa21.05■□□□□ 0.96
PDLIM4-206ENST00000474421 TARSL2A2RTX5 802 aaKnown RBP21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 TRIM16O95361 564 aa21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 CER1O95813 267 aa21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 AFF3P51826 1226 aaKnown RBP21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 ECT2LQ008S8 904 aa21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 TAF5Q15542 800 aa21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 FSCBQ5H9T9 825 aa21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 CT47A1Q5JQC4 288 aaPredicted RBP21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 RABGAP1LQ5R372 815 aa21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 DEFB106AQ8N104 65 aa21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 SNX19Q92543 992 aa21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 MYO19Q96H55 970 aa21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 PPP1R9BQ96SB3 815 aa21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 TUBGCP2Q9BSJ2 902 aa21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 NUP62CLQ9H1M0 184 aa21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 C6orf106Q9H6K1 298 aaPredicted RBP21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 WASF3Q9UPY6 502 aa21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.04■□□□□ 0.96
PDLIM4-206ENST00000474421 EDDM13A0A1B0GTR0 161 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 FOXN3O00409 490 aaPredicted RBP21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 ZNF883P0CG24 379 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 NNMTP40261 264 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 SULT2A1Q06520 285 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 TEAD4Q15561 434 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 DPCR1Q3MIW9 517 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 OR6B2Q6IFH4 312 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 MMS22LQ6ZRQ5 1243 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 ZDHHC17Q8IUH5 632 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 FAM71AQ8IYT1 594 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 C1orf131Q8NDD1 294 aaKnown RBP21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 C1orf216Q8TAB5 229 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 GANCQ8TET4 914 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 MRGPRX3Q96LB0 322 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 PABPC3Q9H361 631 aaKnown RBP21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 OSGEPQ9NPF4 335 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms