RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 NUP58Q9BVL2 599 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 NUCKS1Q9H1E3 243 aaKnown RBP21.18■□□□□ 0.98
SNX13-206ENST00000474067 TMEM245Q9H330 911 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 WDCPQ9H6R7 721 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 USP36Q9P275 1121 aaKnown RBP21.18■□□□□ 0.98
SNX13-206ENST00000474067 CFAP54Q96N23 3096 aa21.18■□□□□ 0.98
SNX13-206ENST00000474067 SYNJ2BP-COX16A0A087WUM0 186 aa21.17■□□□□ 0.98
SNX13-206ENST00000474067 DNTTP04053 509 aa21.17■□□□□ 0.98
SNX13-206ENST00000474067 PNMA6AP0CW24 399 aaPredicted RBP21.17■□□□□ 0.98
SNX13-206ENST00000474067 DESP17661 470 aa21.17■□□□□ 0.98
SNX13-206ENST00000474067 ATXN3P54252 364 aaPredicted RBP21.17■□□□□ 0.98
SNX13-206ENST00000474067 RPS24P62847 133 aaKnown RBP21.17■□□□□ 0.98
SNX13-206ENST00000474067 TPM4P67936 248 aa21.17■□□□□ 0.98
SNX13-206ENST00000474067 CDR2Q01850 454 aa21.17■□□□□ 0.98
SNX13-206ENST00000474067 EIF4EBP2Q13542 120 aaPredicted RBP21.17■□□□□ 0.98
SNX13-206ENST00000474067 CCDC6Q16204 474 aa21.17■□□□□ 0.98
SNX13-206ENST00000474067 STPG1Q5TH74 334 aa21.17■□□□□ 0.98
SNX13-206ENST00000474067 TAF3Q5VWG9 929 aa21.17■□□□□ 0.98
SNX13-206ENST00000474067 TMEM215Q68D42 235 aa21.17■□□□□ 0.98
SNX13-206ENST00000474067 DPY19L2P1Q6NXN4 242 aa21.17■□□□□ 0.98
SNX13-206ENST00000474067 PPP1R2P3Q6NXS1 205 aa21.17■□□□□ 0.98
SNX13-206ENST00000474067 PGAP3Q96FM1 320 aaPredicted RBP21.17■□□□□ 0.98
SNX13-206ENST00000474067 GANQ9H2C0 597 aa21.17■□□□□ 0.98
SNX13-206ENST00000474067 COX16Q9P0S2 106 aa21.17■□□□□ 0.98
SNX13-206ENST00000474067 MBD1Q9UIS9 605 aaPredicted RBP21.17■□□□□ 0.98
SNX13-206ENST00000474067 GRAP2O75791 330 aa21.16■□□□□ 0.98
SNX13-206ENST00000474067 IGLV3-19P01714 112 aa21.16■□□□□ 0.98
SNX13-206ENST00000474067 PRKCHP24723 683 aa21.16■□□□□ 0.98
SNX13-206ENST00000474067 SGSHP51688 502 aa21.16■□□□□ 0.98
SNX13-206ENST00000474067 DEUP1Q05D60 604 aa21.16■□□□□ 0.98
SNX13-206ENST00000474067 TAF5Q15542 800 aa21.16■□□□□ 0.98
SNX13-206ENST00000474067 SLC25A52Q3SY17 297 aa21.16■□□□□ 0.98
SNX13-206ENST00000474067 TRIM61Q5EBN2 209 aa21.16■□□□□ 0.98
SNX13-206ENST00000474067 PEAR1Q5VY43 1037 aaPredicted RBP21.16■□□□□ 0.98
SNX13-206ENST00000474067 SLC23A3Q6PIS1 610 aa21.16■□□□□ 0.98
SNX13-206ENST00000474067 LRRC31Q6UY01 552 aa21.16■□□□□ 0.98
SNX13-206ENST00000474067 RGL4Q8IZJ4 473 aa21.16■□□□□ 0.98
SNX13-206ENST00000474067 P2RY11Q96G91 374 aa21.16■□□□□ 0.98
SNX13-206ENST00000474067 RPRD1AQ96P16 312 aaPredicted RBP21.16■□□□□ 0.98
SNX13-206ENST00000474067 ERGIC2Q96RQ1 377 aa21.16■□□□□ 0.98
SNX13-206ENST00000474067 TMEM9BQ9NQ34 198 aa21.16■□□□□ 0.98
SNX13-206ENST00000474067 NCKAP1Q9Y2A7 1128 aa21.16■□□□□ 0.98
SNX13-206ENST00000474067 TARSL2A2RTX5 802 aaKnown RBP21.15■□□□□ 0.98
SNX13-206ENST00000474067 MEI4A8MW99 385 aa21.15■□□□□ 0.98
SNX13-206ENST00000474067 GFPT2O94808 682 aa21.15■□□□□ 0.98
SNX13-206ENST00000474067 SYPP08247 313 aa21.15■□□□□ 0.98
SNX13-206ENST00000474067 CD70P32970 193 aa21.15■□□□□ 0.98
SNX13-206ENST00000474067 SULT1E1P49888 294 aa21.15■□□□□ 0.98
SNX13-206ENST00000474067 RNASE9P60153 205 aaKnown RBP21.15■□□□□ 0.98
SNX13-206ENST00000474067 GFPT1Q06210 699 aaPredicted RBP21.15■□□□□ 0.98
SNX13-206ENST00000474067 ARID5BQ14865 1188 aa21.15■□□□□ 0.98
SNX13-206ENST00000474067 ZNF776Q68DI1 518 aaPredicted RBP21.15■□□□□ 0.98
SNX13-206ENST00000474067 ARMCX6Q7L4S7 300 aa21.15■□□□□ 0.98
SNX13-206ENST00000474067 NOP9Q86U38 636 aaKnown RBP21.15■□□□□ 0.98
SNX13-206ENST00000474067 CYB5D2Q8WUJ1 264 aa21.15■□□□□ 0.98
SNX13-206ENST00000474067 SORCS1Q8WY21 1168 aa21.15■□□□□ 0.98
SNX13-206ENST00000474067 ZNF419Q96HQ0 510 aaPredicted RBP21.15■□□□□ 0.98
SNX13-206ENST00000474067 NPY6RQ99463 290 aa21.15■□□□□ 0.98
SNX13-206ENST00000474067 MKRN2Q9H000 416 aaKnown RBP21.15■□□□□ 0.98
SNX13-206ENST00000474067 NLRC4Q9NPP4 1024 aa21.15■□□□□ 0.98
SNX13-206ENST00000474067 PILRBQ9UKJ0 227 aa21.15■□□□□ 0.98
SNX13-206ENST00000474067 SLC6A14Q9UN76 642 aa21.15■□□□□ 0.98
SNX13-206ENST00000474067 NUP205Q92621 2012 aa21.15■□□□□ 0.98
SNX13-206ENST00000474067 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.14■□□□□ 0.97
SNX13-206ENST00000474067 GDF9O60383 454 aa21.14■□□□□ 0.97
SNX13-206ENST00000474067 CLDN11O75508 207 aa21.14■□□□□ 0.97
SNX13-206ENST00000474067 MMEP08473 750 aa21.14■□□□□ 0.97
SNX13-206ENST00000474067 CSKP41240 450 aa21.14■□□□□ 0.97
SNX13-206ENST00000474067 PTGER3P43115 390 aa21.14■□□□□ 0.97
SNX13-206ENST00000474067 NSFP46459 744 aaKnown RBP21.14■□□□□ 0.97
SNX13-206ENST00000474067 NOMO3P69849 1222 aa21.14■□□□□ 0.97
SNX13-206ENST00000474067 ECT2LQ008S8 904 aa21.14■□□□□ 0.97
SNX13-206ENST00000474067 ZNF177Q13360 481 aaPredicted RBP21.14■□□□□ 0.97
SNX13-206ENST00000474067 PITRM1Q5JRX3 1037 aa21.14■□□□□ 0.97
SNX13-206ENST00000474067 NAA35Q5VZE5 725 aa21.14■□□□□ 0.97
SNX13-206ENST00000474067 CCAR2Q8N163 923 aaKnown RBP21.14■□□□□ 0.97
SNX13-206ENST00000474067 CFAP52Q8N1V2 620 aa21.14■□□□□ 0.97
SNX13-206ENST00000474067 AOPEPQ8N6M6 819 aa21.14■□□□□ 0.97
SNX13-206ENST00000474067 HSPA12BQ96MM6 686 aa21.14■□□□□ 0.97
SNX13-206ENST00000474067 WSB2Q9NYS7 404 aaPredicted RBP21.14■□□□□ 0.97
SNX13-206ENST00000474067 TPX2Q9ULW0 747 aaKnown RBP21.14■□□□□ 0.97
SNX13-206ENST00000474067 SIK3Q9Y2K2 1263 aa21.14■□□□□ 0.97
SNX13-206ENST00000474067 CKAP5Q14008 2032 aa21.14■□□□□ 0.97
SNX13-206ENST00000474067 EDDM13A0A1B0GTR0 161 aa21.13■□□□□ 0.97
SNX13-206ENST00000474067 LNP1A1A4G5 178 aa21.13■□□□□ 0.97
SNX13-206ENST00000474067 ANKRD62A6NC57 917 aa21.13■□□□□ 0.97
SNX13-206ENST00000474067 CFIP05156 583 aa21.13■□□□□ 0.97
SNX13-206ENST00000474067 SERPINF2P08697 491 aa21.13■□□□□ 0.97
SNX13-206ENST00000474067 C7P10643 843 aa21.13■□□□□ 0.97
SNX13-206ENST00000474067 ZNF18P17022 549 aa21.13■□□□□ 0.97
SNX13-206ENST00000474067 TPMTP51580 245 aa21.13■□□□□ 0.97
SNX13-206ENST00000474067 COPAP53621 1224 aa21.13■□□□□ 0.97
SNX13-206ENST00000474067 JAM2P57087 298 aa21.13■□□□□ 0.97
SNX13-206ENST00000474067 PTPRNQ16849 979 aa21.13■□□□□ 0.97
SNX13-206ENST00000474067 HNRNPA1L2Q32P51 320 aaKnown RBP21.13■□□□□ 0.97
SNX13-206ENST00000474067 PLEKHG6Q3KR16 790 aa21.13■□□□□ 0.97
SNX13-206ENST00000474067 ARL13BQ3SXY8 428 aa21.13■□□□□ 0.97
SNX13-206ENST00000474067 XYLT1Q86Y38 959 aa21.13■□□□□ 0.97
SNX13-206ENST00000474067 NT5C3BQ969T7 300 aa21.13■□□□□ 0.97
SNX13-206ENST00000474067 TOE1Q96GM8 510 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms