RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 SALL4Q9UJQ4 1053 aa12.72□□□□□ -0.37
PRKCB-205ENST00000472066 SLC27A6Q9Y2P4 619 aa12.72□□□□□ -0.37
PRKCB-205ENST00000472066 DUSP10Q9Y6W6 482 aa12.72□□□□□ -0.37
PRKCB-205ENST00000472066 COL4A3Q01955 1670 aa12.72□□□□□ -0.37
PRKCB-205ENST00000472066 K7EQS6 105 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 NCAM2O15394 837 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 NRDCO43847 1150 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 CNTN5O94779 1100 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 LUC7L3O95232 432 aaKnown RBP12.71□□□□□ -0.37
PRKCB-205ENST00000472066 EGFP01133 1207 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 APODP05090 189 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 PTMAP06454 111 aaKnown RBP12.71□□□□□ -0.37
PRKCB-205ENST00000472066 IL1R2P27930 398 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 L1CAMP32004 1257 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 MAN1A1P33908 653 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 TNFRSF4P43489 277 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 IRAK1P51617 712 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 SLC25A11Q02978 314 aaKnown RBP12.71□□□□□ -0.37
PRKCB-205ENST00000472066 KDSRQ06136 332 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 KIF5AQ12840 1032 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 CCINQ13939 588 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 CA9Q16790 459 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 HADHQ16836 314 aaKnown RBP12.71□□□□□ -0.37
PRKCB-205ENST00000472066 KCNT1Q5JUK3 1230 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 MANEALQ5VSG8 457 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 TXNRD3NBQ6F5E7 133 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 CIR1Q86X95 450 aaPredicted RBP12.71□□□□□ -0.37
PRKCB-205ENST00000472066 PSTKQ8IV42 348 aaKnown RBP12.71□□□□□ -0.37
PRKCB-205ENST00000472066 MFN1Q8IWA4 741 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 CCDC105Q8IYK2 499 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 CCAR2Q8N163 923 aaKnown RBP12.71□□□□□ -0.37
PRKCB-205ENST00000472066 TXLNBQ8N3L3 684 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 CARNMT1Q8N4J0 409 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 FBXL6Q8N531 539 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 EZH1Q92800 747 aaPredicted RBP12.71□□□□□ -0.37
PRKCB-205ENST00000472066 SNRNP25Q9BV90 132 aaKnown RBP12.71□□□□□ -0.37
PRKCB-205ENST00000472066 C1QTNF1Q9BXJ1 281 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 ZWILCHQ9H900 591 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 GPATCH2LQ9NWQ4 482 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 PPARGC1AQ9UBK2 798 aaKnown RBP12.71□□□□□ -0.37
PRKCB-205ENST00000472066 AP4E1Q9UPM8 1137 aa12.71□□□□□ -0.37
PRKCB-205ENST00000472066 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.7□□□□□ -0.38
PRKCB-205ENST00000472066 A0A0U1RQJ8 604 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 A0A1B0GVM2 712 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 TBC1D3BA6NDS4 549 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 TCAF2A6NFQ2 919 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 PRR33A8MZF0 331 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 H0Y626 953 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 BUB1O43683 1085 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 BUB1BO60566 1050 aaPredicted RBP12.7□□□□□ -0.38
PRKCB-205ENST00000472066 CLDN11O75508 207 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 LRIG2O94898 1065 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 DCNP07585 359 aaKnown RBP12.7□□□□□ -0.38
PRKCB-205ENST00000472066 RARAP10276 462 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 AOC1P19801 751 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 HLA-FP30511 346 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 SLC1A1P43005 524 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 SSR1P43307 286 aaKnown RBP12.7□□□□□ -0.38
PRKCB-205ENST00000472066 CDH4P55283 916 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 TAS2R40P59535 323 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 SEMA3BQ13214 749 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 ZNF177Q13360 481 aaPredicted RBP12.7□□□□□ -0.38
PRKCB-205ENST00000472066 LRRC32Q14392 662 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 GEN1Q17RS7 908 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 ALFQ53S48 1182 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 FSCBQ5H9T9 825 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 TMEM31Q5JXX7 168 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 DGKKQ5KSL6 1271 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 NUDT18Q6ZVK8 323 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 CHST9Q7L1S5 443 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 KIAA0907Q7Z7F0 614 aaPredicted RBP12.7□□□□□ -0.38
PRKCB-205ENST00000472066 CCDC117Q8IWD4 279 aaPredicted RBP12.7□□□□□ -0.38
PRKCB-205ENST00000472066 SFTPA1Q8IWL2 248 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 ZNF557Q8N988 423 aaPredicted RBP12.7□□□□□ -0.38
PRKCB-205ENST00000472066 TERB1Q8NA31 727 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 WFDC5Q8TCV5 224 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 TEKT4Q8WW24 435 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 ATRIPQ8WXE1 791 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 CLDN23Q96B33 292 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 LMLNQ96KR4 655 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 CALR3Q96L12 384 aaKnown RBP12.7□□□□□ -0.38
PRKCB-205ENST00000472066 ZYG11BQ9C0D3 744 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 DHX35Q9H5Z1 703 aaKnown RBP12.7□□□□□ -0.38
PRKCB-205ENST00000472066 RBM12Q9NTZ6 932 aaKnown RBP12.7□□□□□ -0.38
PRKCB-205ENST00000472066 ABCB8Q9NUT2 735 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 MPP6Q9NZW5 540 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 TICRRQ7Z2Z1 1910 aa12.7□□□□□ -0.38
PRKCB-205ENST00000472066 PRRT4C9JH25 899 aa12.69□□□□□ -0.38
PRKCB-205ENST00000472066 CREB3O43889 395 aa12.69□□□□□ -0.38
PRKCB-205ENST00000472066 CD70P32970 193 aa12.69□□□□□ -0.38
PRKCB-205ENST00000472066 RPS9P46781 194 aaKnown RBP12.69□□□□□ -0.38
PRKCB-205ENST00000472066 NAP1L1P55209 391 aaKnown RBP12.69□□□□□ -0.38
PRKCB-205ENST00000472066 LMAN2Q12907 356 aa12.69□□□□□ -0.38
PRKCB-205ENST00000472066 CDH18Q13634 790 aa12.69□□□□□ -0.38
PRKCB-205ENST00000472066 SMTNL2Q2TAL5 461 aa12.69□□□□□ -0.38
PRKCB-205ENST00000472066 FBXO43Q4G163 708 aa12.69□□□□□ -0.38
PRKCB-205ENST00000472066 EMC10Q5UCC4 262 aa12.69□□□□□ -0.38
PRKCB-205ENST00000472066 CXorf57Q6NSI4 855 aaKnown RBP12.69□□□□□ -0.38
PRKCB-205ENST00000472066 RWDD4Q6NW29 188 aaKnown RBP12.69□□□□□ -0.38
PRKCB-205ENST00000472066 SYNPOQ8N3V7 929 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms