RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 GALEQ14376 348 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 MAPKAPK3Q16644 382 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 ZNF628Q5EBL2 1059 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 C10orf76Q5T2E6 689 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 NADSYN1Q6IA69 706 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 C16orf89Q6UX73 402 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 C7orf57Q8NEG2 295 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 TIFAQ96CG3 184 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 CDT1Q9H211 546 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 RGL1Q9NZL6 768 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 INSL5Q9Y5Q6 135 aa3.88□□□□□ -1.79
PRPF40A-207ENST00000471701 SHROOM4Q9ULL8 1493 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 J3KTA2 159 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 KRT86O43790 486 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 LCKP06239 509 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 GABRB3P28472 473 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 HOXD3P31249 432 aaPredicted RBP3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 PMPCAQ10713 525 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 KEAP1Q14145 624 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 GALNT3Q14435 633 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 KRT81Q14533 505 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 KIAA1755Q5JYT7 1200 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 MSANTD2Q6P1R3 559 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 FBXO38Q6PIJ6 1188 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 SLC16A12Q6ZSM3 486 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 Q6ZTK2 550 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 CTU1Q7Z7A3 348 aaKnown RBP3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 MORC1Q86VD1 984 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 PAQR4Q8N4S7 273 aaPredicted RBP3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 RNF152Q8N8N0 203 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 GLIS1Q8NBF1 620 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 SLC22A17Q8WUG5 538 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 NPIPB3Q92617 1050 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 TBCBQ99426 244 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 SPAG4Q9NPE6 437 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 STARD7Q9NQZ5 370 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 DDX21Q9NR30 783 aaKnown RBP eCLIP3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 HELLSQ9NRZ9 838 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 TBC1D14Q9P2M4 693 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 CEP83Q9Y592 693 aa3.87□□□□□ -1.79
PRPF40A-207ENST00000471701 A0A1W2PPC4 97 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 IFITM10A6NMD0 228 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 KIF3BO15066 747 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 KAT7O95251 611 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 TSHRP16473 764 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 CASP5P51878 434 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 RRP1P56182 461 aaKnown RBP3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 DSCR9P59020 149 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 INO80DQ53TQ3 878 aaPredicted RBP3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 OTUD1Q5VV17 481 aaPredicted RBP3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 ANKRD40Q6AI12 368 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 ERAP2Q6P179 960 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 TMEM88Q6PEY1 159 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 NR2C2APQ86WQ0 139 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 DGKHQ86XP1 1220 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 CAMK1DQ8IU85 385 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 ZBTB8BQ8NAP8 495 aaPredicted RBP3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 DNASE2BQ8WZ79 361 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 PAAF1Q9BRP4 392 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 TM6SF1Q9BZW5 370 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 CD93Q9NPY3 652 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 NCKIPSDQ9NZQ3 722 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 CA14Q9ULX7 337 aa3.86□□□□□ -1.79
PRPF40A-207ENST00000471701 LOC105371045A0A1W2PR82 267 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 MSI1O43347 362 aaKnown RBP3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 TAF5LO75529 589 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 ALDOAP04075 364 aaKnown RBP3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 ITGA5P08648 1049 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 ALDOCP09972 364 aaKnown RBP3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 ARSBP15848 533 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 PCYT1AP49585 367 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 PRIM2P49643 509 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 RASSF2P50749 326 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 RPL36AP83881 106 aaKnown RBP3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 SHC2P98077 582 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 DSC1Q08554 894 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 COBLL1Q53SF7 1204 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 ALG10Q5BKT4 473 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 ALG10BQ5I7T1 473 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 ZNF569Q5MCW4 686 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 PRAMEF19Q5SWL8 479 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 USP43Q70EL4 1123 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 GABPB2Q8TAK5 448 aaPredicted RBP3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 WDR60Q8WVS4 1066 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 ZNF566Q969W8 418 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 PHF21BQ96EK2 531 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 ADAD1Q96M93 576 aaKnown RBP3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 DCLK3Q9C098 648 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 C6orf106Q9H6K1 298 aaPredicted RBP3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 MAP6D1Q9H9H5 199 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 PLAC1Q9HBJ0 212 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 KRCC1Q9NPI7 259 aaPredicted RBP3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 FAM50BQ9Y247 325 aa3.85□□□□□ -1.79
PRPF40A-207ENST00000471701 FAM234BA2RU67 622 aa3.84□□□□□ -1.79
PRPF40A-207ENST00000471701 C3orf70A6NLC5 250 aaPredicted RBP3.84□□□□□ -1.79
PRPF40A-207ENST00000471701 BECN2A8MW95 431 aa3.84□□□□□ -1.79
PRPF40A-207ENST00000471701 PODXLO00592 558 aa3.84□□□□□ -1.79
PRPF40A-207ENST00000471701 NKX2-8O15522 239 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms