RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 GGA2Q9UJY4 613 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 HCN2Q9UL51 889 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 VANGL2Q9ULK5 521 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 ATG2BQ96BY7 2078 aa15.79■□□□□ 0.12
SDC3-203ENST00000471567 ANTXRLA6NF34 631 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 H0Y626 953 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 ATMINO43313 823 aaPredicted RBP15.78■□□□□ 0.12
SDC3-203ENST00000471567 NTSR1P30989 418 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 OXCT1P55809 520 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 NRG1Q02297 640 aaPredicted RBP15.78■□□□□ 0.12
SDC3-203ENST00000471567 CDH18Q13634 790 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 RAB6CQ53S08 254 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 EGFLAMQ63HQ2 1017 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 SDE2Q6IQ49 451 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 CHST9Q7L1S5 443 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 C14orf80Q86SX3 495 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 ZNF683Q8IZ20 524 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 AHI1Q8N157 1196 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 CARNMT1Q8N4J0 409 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 CCDC33Q8N5R6 958 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 TXNDC5Q8NBS9 432 aaKnown RBP15.78■□□□□ 0.12
SDC3-203ENST00000471567 WFDC5Q8TCV5 224 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 IGSF8Q969P0 613 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 LMLNQ96KR4 655 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 CCDC42Q96M95 316 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 CHP1Q99653 195 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 NCAPGQ9BPX3 1015 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 RAB6CQ9H0N0 254 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 OSBPL2Q9H1P3 480 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 ZSCAN32Q9NX65 697 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 KIAA1522Q9P206 1035 aaPredicted RBP15.78■□□□□ 0.12
SDC3-203ENST00000471567 MYO1AQ9UBC5 1043 aa15.78■□□□□ 0.12
SDC3-203ENST00000471567 IGLV3-10A0A075B6K4 115 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 CCDC163A0A0D9SF12 145 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 DRGXA6NNA5 263 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 AKR1B10O60218 316 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 CLDN11O75508 207 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 CYP1A2P05177 515 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 PSMA2P25787 234 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 CD70P32970 193 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 DGKEP52429 567 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 GALCP54803 685 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 AIF1P55008 147 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 CDH4P55283 916 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 OGDHQ02218 1023 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 NHLH1Q02575 133 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 GFPT1Q06210 699 aaPredicted RBP15.77■□□□□ 0.12
SDC3-203ENST00000471567 SCAPQ12770 1279 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 SLC12A1Q13621 1099 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 CRY1Q16526 586 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 TMEM215Q68D42 235 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 ZC3H14Q6PJT7 736 aaKnown RBP15.77■□□□□ 0.12
SDC3-203ENST00000471567 TSSK4Q6SA08 328 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 ADIPOR2Q86V24 386 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 CCAR2Q8N163 923 aaKnown RBP15.77■□□□□ 0.12
SDC3-203ENST00000471567 TC2NQ8N9U0 490 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 PPP1R9BQ96SB3 815 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 THAP2Q9H0W7 228 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 NHEJ1Q9H9Q4 299 aaPredicted RBP15.77■□□□□ 0.12
SDC3-203ENST00000471567 TMPRSS4Q9NRS4 437 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 THAP10Q9P2Z0 257 aaPredicted RBP15.77■□□□□ 0.12
SDC3-203ENST00000471567 PCDHGA2Q9Y5H1 932 aa15.77■□□□□ 0.12
SDC3-203ENST00000471567 MYO18AQ92614 2054 aaKnown RBP15.76■□□□□ 0.11
SDC3-203ENST00000471567 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.76■□□□□ 0.11
SDC3-203ENST00000471567 E9PAM4 449 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 SGK1O00141 431 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 ADAM23O75077 832 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 RNF8O76064 485 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 MOCS3O95396 460 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 APBB3O95704 486 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 ATP5BP06576 529 aaKnown RBP15.76■□□□□ 0.11
SDC3-203ENST00000471567 GGCXP38435 758 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 LMAN2Q12907 356 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 ZNF177Q13360 481 aaPredicted RBP15.76■□□□□ 0.11
SDC3-203ENST00000471567 ENPP2Q13822 863 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 ACAP1Q15027 740 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 FSCBQ5H9T9 825 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 MBLAC2Q68D91 279 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 SLFN11Q7Z7L1 901 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 CHPFQ8IZ52 775 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 ZBTB44Q8NCP5 570 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 TTC17Q96AE7 1141 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 GABRG3Q99928 467 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 CIPCQ9C0C6 399 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 RETREG1Q9H6L5 497 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 POLMQ9NP87 494 aaPredicted RBP15.76■□□□□ 0.11
SDC3-203ENST00000471567 PPARGC1AQ9UBK2 798 aaKnown RBP15.76■□□□□ 0.11
SDC3-203ENST00000471567 OR12D3Q9UGF7 316 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 EBF1Q9UH73 591 aa15.76■□□□□ 0.11
SDC3-203ENST00000471567 ASLP04424 464 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 H2AFZP0C0S5 128 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 POLR2EP19388 210 aaKnown RBP15.75■□□□□ 0.11
SDC3-203ENST00000471567 CDC25BP30305 580 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 NBL1P41271 181 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 PLK1P53350 603 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 SCYL2Q6P3W7 929 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 H2AFVQ71UI9 128 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 WDR5BQ86VZ2 330 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 LONP2Q86WA8 852 aa15.75■□□□□ 0.11
SDC3-203ENST00000471567 CCDC185Q8N715 623 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms