RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 RIPOR3Q96MK2 946 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 NECTIN4Q96NY8 510 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 OLFM3Q96PB7 478 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 ZNF670Q9BS34 389 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 OSBPL8Q9BZF1 889 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 DHX35Q9H5Z1 703 aaKnown RBP10.21□□□□□ -0.77
SF3A1-207ENST00000471342 FBRSL1Q9HCM7 1045 aaKnown RBP10.21□□□□□ -0.77
SF3A1-207ENST00000471342 MPP6Q9NZW5 540 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 MARK1Q9P0L2 795 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 RCOR3Q9P2K3 495 aaPredicted RBP10.21□□□□□ -0.77
SF3A1-207ENST00000471342 SAE1Q9UBE0 346 aaPredicted RBP10.21□□□□□ -0.77
SF3A1-207ENST00000471342 ZMYM5Q9UJ78 669 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 EFR3BQ9Y2G0 817 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 TBC1D30Q9Y2I9 924 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 MRFAP1Q9Y605 127 aa10.21□□□□□ -0.77
SF3A1-207ENST00000471342 KCNK3O14649 394 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 TP73O15350 636 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 ZMPSTE24O75844 475 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 ZRANB2O95218 330 aaKnown RBP eCLIP10.2□□□□□ -0.78
SF3A1-207ENST00000471342 MOCS2O96007 188 aaPredicted RBP10.2□□□□□ -0.78
SF3A1-207ENST00000471342 CKMP06732 381 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 NAP1L1P55209 391 aaKnown RBP10.2□□□□□ -0.78
SF3A1-207ENST00000471342 COPS2P61201 443 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 TNK2Q07912 1038 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 PDK2Q15119 407 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 CYP1B1Q16678 543 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 TTC27Q6P3X3 843 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 ARHGAP36Q6ZRI8 547 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 TADA2BQ86TJ2 420 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 MFSD6LQ8IWD5 586 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 UNC45BQ8IWX7 931 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 CFAP52Q8N1V2 620 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 SLC44A3Q8N4M1 653 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 MAFAQ8NHW3 353 aaPredicted RBP10.2□□□□□ -0.78
SF3A1-207ENST00000471342 SLC35B2Q8TB61 432 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 LRRN4Q8WUT4 740 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 GOLGA1Q92805 767 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 NCAPGQ9BPX3 1015 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 KXD1Q9BQD3 176 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 PHF7Q9BWX1 381 aaPredicted RBP10.2□□□□□ -0.78
SF3A1-207ENST00000471342 HEMGNQ9BXL5 484 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 SIK2Q9H0K1 926 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 USP29Q9HBJ7 922 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 TMEM51Q9NW97 253 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 TMEM248Q9NWD8 314 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 DTLQ9NZJ0 730 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 VANGL2Q9ULK5 521 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 ZFP37Q9Y6Q3 630 aaPredicted RBP10.2□□□□□ -0.78
SF3A1-207ENST00000471342 NUMBLQ9Y6R0 609 aa10.2□□□□□ -0.78
SF3A1-207ENST00000471342 LRRD1A4D1F6 860 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 HOXC11O43248 304 aaPredicted RBP10.19□□□□□ -0.78
SF3A1-207ENST00000471342 MFSD11O43934 449 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 TSPAN3O60637 253 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 KRT1P04264 644 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 CYP17A1P05093 508 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 SLC2A3P11169 496 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 RHOQP17081 205 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 GJC1P36383 396 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 AVPR1AP37288 418 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 OPRD1P41143 372 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 PTGIRP43119 386 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 DNA2P51530 1060 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 NRLP54845 237 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 ZP2Q05996 745 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 GRM2Q14416 872 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 DHCR24Q15392 516 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 OASLQ15646 514 aaKnown RBP10.19□□□□□ -0.78
SF3A1-207ENST00000471342 HADHQ16836 314 aaKnown RBP10.19□□□□□ -0.78
SF3A1-207ENST00000471342 ARHGAP15Q53QZ3 475 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 MPP7Q5T2T1 576 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 CES5AQ6NT32 575 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 LGI2Q8N0V4 545 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 UMODL1-AS1Q8N2C9 162 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 RTL3Q8N8U3 475 aaKnown RBP10.19□□□□□ -0.78
SF3A1-207ENST00000471342 ATP6V0D2Q8N8Y2 350 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 BPIFB1Q8TDL5 484 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 OSCP1Q8WVF1 389 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 PBKQ96KB5 322 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 ALS2CR12Q96Q35 445 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 SLC39A8Q9C0K1 460 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 C10orf88Q9H8K7 445 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 KIF9Q9HAQ2 790 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 KCNK12Q9HB15 430 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 DDX56Q9NY93 547 aaKnown RBP10.19□□□□□ -0.78
SF3A1-207ENST00000471342 CDC23Q9UJX2 597 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 SAR1BQ9Y6B6 198 aa10.19□□□□□ -0.78
SF3A1-207ENST00000471342 NUP210Q8TEM1 1887 aaPredicted RBP10.19□□□□□ -0.78
SF3A1-207ENST00000471342 HELZP42694 1942 aaKnown RBP10.18□□□□□ -0.78
SF3A1-207ENST00000471342 A0A0D9SEW6 157 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 CTAGE9A4FU28 777 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 ZNF821O75541 412 aaPredicted RBP10.18□□□□□ -0.78
SF3A1-207ENST00000471342 SRGAP2BP0DMP2 458 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 MZF1P28698 734 aaPredicted RBP10.18□□□□□ -0.78
SF3A1-207ENST00000471342 CASQ1P31415 396 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 SLC6A11P48066 632 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 PLK1P53350 603 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 TFDP3Q5H9I0 405 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 LY6G5CQ5SRR4 150 aa10.18□□□□□ -0.78
SF3A1-207ENST00000471342 PTCRAQ6ISU1 281 aaPredicted RBP10.18□□□□□ -0.78
SF3A1-207ENST00000471342 ELMSAN1Q6PJG2 1045 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms