RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 CELF5Q8N6W0 485 aaKnown RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 PQLC3Q8N755 202 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 RTL3Q8N8U3 475 aaKnown RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 NOA1Q8NC60 698 aaKnown RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 HJURPQ8NCD3 748 aaPredicted RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 ZSCAN18Q8TBC5 510 aaPredicted RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 TFB1MQ8WVM0 346 aaKnown RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 NKD2Q969F2 451 aaPredicted RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 FAM161BQ96MY7 647 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 SLC22A12Q96S37 553 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 FAM118BQ9BPY3 351 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 MAGEB5Q9BZ81 275 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 TTYH1Q9H313 450 aaPredicted RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 THG1LQ9NWX6 298 aaKnown RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.05□□□□□ -0.8
CCM2-204ENST00000470837 PCYOX1Q9UHG3 505 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 DNPEPQ9ULA0 475 aa10.05□□□□□ -0.8
CCM2-204ENST00000470837 DRG1Q9Y295 367 aaKnown RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 R3HDM2Q9Y2K5 976 aaKnown RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 V9GYY5 206 aaPredicted RBP10.05□□□□□ -0.8
CCM2-204ENST00000470837 PLXNA3P51805 1871 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 GOLGA6L7A0A1B0GV03 622 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 TARSL2A2RTX5 802 aaKnown RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 ARHGAP42A6NI28 874 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 I6L893 689 aaPredicted RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 DFFAO00273 331 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 DCLK1O15075 740 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 MTSS1O43312 755 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 TSPAN3O60637 253 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 RAMP2O60895 175 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 CLDN11O75508 207 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 HEXIM1O94992 359 aaKnown RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 PAPLNO95428 1278 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 GLP2RO95838 553 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 IFNB1P01574 187 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 ITGAVP06756 1048 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 PECAM1P16284 738 aaPredicted RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 POU3F3P20264 500 aaPredicted RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 HOXC13P31276 330 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 ETFBP38117 255 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 MAPKAPK2P49137 400 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 CDH4P55283 916 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 ADCY2Q08462 1091 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 AP1B1Q10567 949 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 CBX2Q14781 532 aaPredicted RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 SIX1Q15475 284 aaPredicted RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 SKIV2LQ15477 1246 aaKnown RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 ERCC6LQ2NKX8 1250 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 MPPE1Q53F39 396 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 C6orf118Q5T5N4 469 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 MANEALQ5VSG8 457 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 HEATR6Q6AI08 1181 aaKnown RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 RFWD3Q6PCD5 774 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 SYCE2Q6PIF2 218 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 NPNTQ6UXI9 565 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 TFAP2DQ7Z6R9 452 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 C14orf80Q86SX3 495 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 IFT20Q8IY31 132 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 ATPAF2Q8N5M1 289 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 TDRD5Q8NAT2 981 aaKnown RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 ITFG1Q8TB96 612 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 DDI1Q8WTU0 396 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 NSMCE1Q8WV22 266 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 RUBCNQ92622 972 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 USP13Q92995 863 aaPredicted RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 E2F7Q96AV8 911 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 OTUB2Q96DC9 234 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 PABPC5Q96DU9 382 aaKnown RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 TMA16Q96EY4 203 aaKnown RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 ZFRQ96KR1 1074 aaKnown RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 NECTIN4Q96NY8 510 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 PRMT1Q99873 361 aaKnown RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 HERPUD2Q9BSE4 406 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 LRRC1Q9BTT6 524 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 SMG9Q9H0W8 520 aaKnown RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 HAUS2Q9NVX0 235 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 DTLQ9NZJ0 730 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 MPP6Q9NZW5 540 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 SAE1Q9UBE0 346 aaPredicted RBP10.04□□□□□ -0.8
CCM2-204ENST00000470837 ASIC3Q9UHC3 531 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 CDH7Q9ULB5 785 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 HPCAL4Q9UM19 191 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 NR2E1Q9Y466 385 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 MYO16Q9Y6X6 1858 aa10.04□□□□□ -0.8
CCM2-204ENST00000470837 IGLV3-10A0A075B6K4 115 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 A0A1B0GVM2 712 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 TCAF2A6NFQ2 919 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 DRGXA6NNA5 263 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 WASH4PA8MWX3 477 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 H0Y626 953 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 KCNN4O15554 427 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 TTI1O43156 1089 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 RAD51CO43502 376 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 MFSD11O43934 449 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 TBL1XO60907 577 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 MOSPD3O75425 235 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 KLKB1P03952 638 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 WEE1P30291 646 aa10.03□□□□□ -0.8
CCM2-204ENST00000470837 GBP2P32456 591 aaPredicted RBP10.03□□□□□ -0.8
CCM2-204ENST00000470837 ADCY8P40145 1251 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms